RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 HP1BP3Q5SSJ5 553 aaPredicted RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 SH2D5Q6ZV89 423 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 RHPN2Q8IUC4 686 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNF8-203ENST00000504000 CMASQ8NFW8 434 aaPredicted RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 TMEM143Q96AN5 459 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ATG4CQ96DT6 458 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 WDR83Q9BRX9 315 aaKnown RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 PNPLA8Q9NP80 782 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ZFATQ9P243 1243 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 CST8O60676 142 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 NEBLO76041 1014 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 KRT3P12035 628 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 PTDSS1P48651 473 aaKnown RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 NEK3P51956 506 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 MTMR2Q13614 643 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 LBRQ14739 615 aaKnown RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 PRKD1Q15139 912 aaPredicted RBP15.69■□□□□ 0.1
SNF8-203ENST00000504000 DUOXA2Q1HG44 320 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 ANKRD22Q5VYY1 191 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 SLC44A1Q8WWI5 657 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 SKA1Q96BD8 255 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 APOPT1Q96IL0 206 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 NSL1Q96IY1 281 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 TSSK1BQ9BXA7 367 aa15.69■□□□□ 0.1
SNF8-203ENST00000504000 SSC5DA1L4H1 1573 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 GSC2O15499 205 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 TOM1L1O75674 476 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 HAUS5O94927 633 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 MT-ND3P03897 115 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 BRD2P25440 801 aaKnown RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 PSMA2P25787 234 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 SSTR3P32745 418 aaPredicted RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 RFC1P35251 1148 aaPredicted RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 ARFIP2P53365 341 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 GDF10P55107 478 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 CDK16Q00536 496 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 CDK18Q07002 472 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 TARBP2Q15633 366 aaKnown RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 ARMC2Q8NEN0 867 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 HAUS1Q96CS2 278 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 C12orf42Q96LP6 360 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 MIPEPQ99797 713 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 CADM1Q9BY67 442 aaKnown RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 KCNK13Q9HB14 408 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 CNTN3Q9P232 1028 aa15.68■□□□□ 0.1
SNF8-203ENST00000504000 ZNF214Q9UL59 606 aaPredicted RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 MYH9P35579 1960 aaKnown RBP15.68■□□□□ 0.1
SNF8-203ENST00000504000 GOLGA8SH3BPF8 625 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 GOLGA8MH3BSY2 632 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 MED7O43513 233 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 LPXNO60711 386 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 ATP5BP06576 529 aaKnown RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 DLDP09622 509 aaKnown RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 BACE1P56817 501 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 OCRLQ01968 901 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 SNRNP48Q6IEG0 339 aaKnown RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 CAPN12Q6ZSI9 719 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 ARFGAP1Q8N6T3 406 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 HEY2Q9UBP5 337 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 XPO7Q9UIA9 1087 aaKnown RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 TELO2Q9Y4R8 837 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 COL4A5P29400 1685 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 PPP1R12AO14974 1030 aaPredicted RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 ENTPD5O75356 428 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 TMEM63AO94886 807 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 APBA3O96018 575 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 EDN1P05305 212 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 VHLP40337 213 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 MYL6P60660 151 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 DPYSL3Q14195 570 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 EFTUD2Q15029 972 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNF8-203ENST00000504000 ANO7Q6IWH7 933 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 TRIM42Q8IWZ5 723 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 RFWD2Q8NHY2 731 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 DNAJC9Q8WXX5 260 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 TFAP2BQ92481 460 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 MRPL4Q9BYD3 311 aaKnown RBP15.67■□□□□ 0.1
SNF8-203ENST00000504000 MYOZ2Q9NPC6 264 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 SLC17A7Q9P2U7 560 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 ZNF180Q9UJW8 692 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 TEX264Q9Y6I9 313 aa15.67■□□□□ 0.1
SNF8-203ENST00000504000 A8MXQ7 604 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 MCF2LO15068 1137 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 OGTO15294 1046 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 CHADO15335 359 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 MSCO60682 206 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 BANF1O75531 89 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 ENDOD1O94919 500 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 IL1R2P27930 398 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 ZNF200P98182 395 aaPredicted RBP15.66■□□□□ 0.1
SNF8-203ENST00000504000 PTK7Q13308 1070 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 DGKZQ13574 1117 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 CAPSQ13938 189 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 PTPN20Q4JDL3 420 aa15.66■□□□□ 0.1
SNF8-203ENST00000504000 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms