RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 EDRF1Q3B7T1 1238 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 XKR3Q5GH77 459 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 SPECC1LQ69YQ0 1117 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 SWSAP1Q6NVH7 229 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 GALNT18Q6P9A2 607 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 ZNF365Q70YC5 407 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 PLEKHH3Q7Z736 793 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 PPFIBP1Q86W92 1011 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 SFR1Q86XK3 245 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 VSTM4Q8IW00 320 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 DHX37Q8IY37 1157 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 EXOC8Q8IYI6 725 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 SCFD2Q8WU76 684 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 SEPT1Q8WYJ6 367 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 CEP170P1Q96L14 293 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 DRC1Q96MC2 740 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 DUSP9Q99956 384 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 PORCNQ9H237 461 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 VPS16Q9H269 839 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 C17orf75Q9HAS0 396 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 ZNF302Q9NR11 478 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 TBC1D7Q9P0N9 293 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 PCDHA2Q9Y5H9 948 aa5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.78□□□□□ -1.482e-7■■■□□ 14.9
HMGXB4-208ENST00000498325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGXB4-208ENST00000498325 RSPH10B2B2RC85 870 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 H0YCG3 227 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 NOP56O00567 594 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 HIP1RO75146 1068 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 PRPF6O94906 941 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 GGPS1O95749 300 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 RSPH10BP0C881 870 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CSF2RAP15509 400 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SCP2P22307 547 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 UBA1P22314 1058 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 PTGS1P23219 599 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SFPQP23246 707 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ADORA2AP29274 412 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 STAT5BP51692 787 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNF131P52739 623 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SNRPFP62306 86 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SP2Q02086 613 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SP4Q02446 784 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 UBXN1Q04323 297 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ADAM9Q13443 819 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TRIM14Q14142 442 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 MAN2A1Q16706 1144 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 KNOP1Q1ED39 458 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 BMT2Q1RMZ1 405 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CCDC144BQ3MJ40 725 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CCDC40Q4G0X9 1142 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ODR4Q5SWX8 454 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CELF3Q5SZQ8 465 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 METTL7BQ6UX53 244 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 EPM2AIP1Q7L775 607 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNF720Q7Z2F6 126 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 GPR142Q7Z601 462 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 LRRC8AQ8IWT6 810 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 NELFCDQ8IXH7 590 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 MSL3Q8N5Y2 521 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CCDC112Q8NEF3 446 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 MCPH1Q8NEM0 835 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 GOLGA5Q8TBA6 731 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SCFD1Q8WVM8 642 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 SOCS4Q8WXH5 440 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 KIFAP3Q92845 792 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 IQCDQ96DY2 449 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TCTN2Q96GX1 697 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 FAM167AQ96KS9 214 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 IFT74Q96LB3 600 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CNOT6LQ96LI5 555 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 FRMD6Q96NE9 622 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TUBGCP2Q9BSJ2 902 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 NOC4LQ9BVI4 516 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 NUP58Q9BVL2 599 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 KCTD10Q9H3F6 313 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 AZI2Q9H6S1 392 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TMEM206Q9H813 350 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 VTA1Q9NP79 307 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TYW1Q9NV66 732 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TAB2Q9NYJ8 693 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CGNQ9P2M7 1197 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 WRAP73Q9P2S5 460 aaPredicted RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 DDX41Q9UJV9 622 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 FAM184BQ9ULE4 1060 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 EXOC7Q9UPT5 735 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 TRAF3IP3Q9Y228 551 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 CFAP47Q6ZTR5 3102 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 KIAA1217Q5T5P2 1943 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNFX1Q9P2E3 1918 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNF318Q5VUA4 2279 aa5.77□□□□□ -1.49
HMGXB4-208ENST00000498325 ASTN1O14525 1302 aa5.76□□□□□ -1.49
HMGXB4-208ENST00000498325 ITIH6Q6UXX5 1313 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms