RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 COL6A1P12109 1028 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SELPP16109 830 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 CYP3A5P20815 502 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 MLH1P40692 756 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 LBX1P52954 281 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 POLE2P56282 527 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 YWHAEP62258 255 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NOP14P78316 857 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TFAMQ00059 246 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 KLHL30Q0D2K2 578 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ZBTB6Q15916 424 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ASTE1Q2TB18 679 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 MAP7D1Q3KQU3 841 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 CEP128Q6ZU80 1094 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF365Q70YC5 407 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NANOGNBQ7Z5D8 188 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PPM1KQ8N3J5 372 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 DDX27Q96GQ7 796 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NAF1Q96HR8 494 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 CCDC42Q96M95 316 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 KREMEN1Q96MU8 473 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TOX2Q96NM4 488 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SMC6Q96SB8 1091 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SH3GL1Q99961 368 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SELENOOQ9BVL4 669 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 FAM192AQ9GZU8 254 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NXF3Q9H4D5 531 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 FAM105AQ9NUU6 356 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 RABL2AQ9UBK7 228 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PADI3Q9ULW8 664 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 UBQLN1Q9UMX0 589 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ADGRG1Q9Y653 693 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 GOLGA6L10A0A0M3HER8 536 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ABL1P00519 1130 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TFRCP02786 760 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 HOXD12P35452 270 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 EIF4A3P38919 411 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 MNX1P50219 401 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 KIF11P52732 1056 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CUL2Q13617 745 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 RCN1Q15293 331 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TAF11Q15544 211 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TDRD12Q587J7 1177 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 C10orf76Q5T2E6 689 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 HIBCHQ6NVY1 386 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC39A5Q6ZMH5 540 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TOGARAM2Q6ZUX3 1019 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 LRRC8DQ7L1W4 858 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 VPS36Q86VN1 386 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 LRRC49Q8IUZ0 686 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 FAM71AQ8IYT1 594 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 C1orf127Q8N9H9 656 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 SMG8Q8ND04 991 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 C1orf131Q8NDD1 294 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 BEST2Q8NFU1 509 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CYFIP2Q96F07 1278 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 KIF12Q96FN5 646 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 FTHL17Q9BXU8 183 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 NIF3L1Q9GZT8 377 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 AGO3Q9H9G7 860 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 UBN1Q9NPG3 1134 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CNTN6Q9UQ52 1028 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 GIT1Q9Y2X7 761 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 PCDHB2Q9Y5E7 798 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM247A6NEH6 219 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 BIRC5O15392 142 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ITGA4P13612 1032 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 P4HA1P13674 534 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CDC25CP30307 473 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 CD52P31358 61 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 BPIFB4P59827 614 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ARPC4P59998 168 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 RBP5P82980 135 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 NFX1Q12986 1120 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF268Q14587 947 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 MTF1Q14872 753 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 SPA17Q15506 151 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ARHGAP44Q17R89 818 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF699Q32M78 642 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 FAAH2Q6GMR7 532 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF554Q86TJ5 538 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 TTC39CQ8N584 583 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 LRRC52Q8N7C0 313 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 UBR7Q8N806 425 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 ANKK1Q8NFD2 765 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 AGAP11Q8TF27 550 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 XYLT2Q9H1B5 865 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 DPP3Q9NY33 737 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 SIX4Q9UIU6 781 aa7.62□□□□□ -1.19
SMARCE1-211ENST00000493660 A0A0U1RQF3 1178 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 C5orf60A6NFR6 353 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM110-MUSTN1A8MSY1 372 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 FOXN3O00409 490 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 INPPL1O15357 1258 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 AKR1B10O60218 316 aa7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-211ENST00000493660 CD97P48960 835 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms