RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 AP1G2O75843 785 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SEC24AO95486 1093 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 C8AP07357 584 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 NPR3P17342 541 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 HOXA9P31269 272 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
SNIP1-202ENST00000468040 GRIK1P39086 918 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 PRKCIP41743 596 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 ALDH1A3P47895 512 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 BCAT1P54687 386 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 CDR2Q01850 454 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 LLGL2Q6P1M3 1020 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 TMEM184AQ6ZMB5 413 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
SNIP1-202ENST00000468040 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 TTC9BQ8N6N2 239 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SLC7A14Q8TBB6 771 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 CRISPLD1Q9H336 500 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 CSNK1G1Q9HCP0 422 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 ABHD10Q9NUJ1 306 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 ZNHIT6Q9NWK9 470 aaKnown RBP16.11■□□□□ 0.17
SNIP1-202ENST00000468040 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
SNIP1-202ENST00000468040 PCDHGC3Q9UN70 934 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SLC27A5Q9Y2P5 690 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 YIPF1Q9Y548 306 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 CEP83Q9Y592 693 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 INSL5Q9Y5Q6 135 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 TRANK1O15050 2925 aa16.11■□□□□ 0.17
SNIP1-202ENST00000468040 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 M0QYV0 167 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 ZMYND10O75800 440 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 MICAL2O94851 1124 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 CALCAP01258 141 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 SERPING1P05155 500 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 ANXA13P27216 316 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 GTF2F1P35269 517 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNIP1-202ENST00000468040 CDR1P51861 262 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 ADKP55263 362 aaKnown RBP16.1■□□□□ 0.17
SNIP1-202ENST00000468040 KLHL30Q0D2K2 578 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 PPM1LQ5SGD2 360 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 SPC24Q8NBT2 197 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
SNIP1-202ENST00000468040 C8orf48Q96LL4 319 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 DUSP16Q9BY84 665 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 SFXN1Q9H9B4 322 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 PNPLA8Q9NP80 782 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 MYO7AQ13402 2215 aa16.1■□□□□ 0.17
SNIP1-202ENST00000468040 PTPRDP23468 1912 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 GLP2RO95838 553 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 LRG1P02750 347 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 HNRNPA1P09651 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 EPHB3P54753 998 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 MAP3K7CLP57077 242 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 BST2Q10589 180 aaKnown RBP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 TWF1Q12792 350 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 ADAM15Q13444 863 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 COL19A1Q14993 1142 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 PKDCCQ504Y2 493 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 TAF3Q5VWG9 929 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 E4F1Q66K89 784 aaPredicted RBP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 CLEC20AQ6ZU45 233 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 TTC30AQ86WT1 665 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 SCN4BQ8IWT1 228 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 VN1R2Q8NFZ6 395 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 UBXN6Q9BZV1 441 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
SNIP1-202ENST00000468040 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
SNIP1-202ENST00000468040 F8VP50 259 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 XPO1O14980 1071 aaKnown RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 LSM8O95777 96 aaKnown RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 POU2F2P09086 479 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 HOXB8P17481 243 aaPredicted RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 CACNA2D1P54289 1103 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 GSDMDP57764 484 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 TDRD12Q587J7 1177 aaKnown RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 DENND1BQ6P3S1 775 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 ITIH5Q86UX2 942 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 VPS36Q86VN1 386 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 ELMOD1Q8N336 334 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 UBA3Q8TBC4 463 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
SNIP1-202ENST00000468040 SPATA17Q96L03 361 aa16.08■□□□□ 0.16
SNIP1-202ENST00000468040 NOX5Q96PH1 765 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms