RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 A0A0C4DFX4 3053 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 B4GALT5O43286 388 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 CSDE1O75534 798 aaKnown RBP6.13□□□□□ -1.43
CXXC4-202ENST00000466963 ANXA13P27216 316 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 CSRP3P50461 194 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 TMPRSS3P57727 454 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 IRX4P78413 519 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 RESTQ13127 1097 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 MTA1Q13330 715 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 ENPP2Q13822 863 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 LPAL2Q16609 132 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 CMTR1Q8N1G2 835 aaKnown RBP6.13□□□□□ -1.43
CXXC4-202ENST00000466963 TPCN2Q8NHX9 752 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 BRF1Q92994 677 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 RSPRY1Q96DX4 576 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 SENP8Q96LD8 212 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 YTHDC1Q96MU7 727 aaKnown RBP6.13□□□□□ -1.43
CXXC4-202ENST00000466963 NUP58Q9BVL2 599 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 USP36Q9P275 1121 aaKnown RBP6.13□□□□□ -1.43
CXXC4-202ENST00000466963 SLC27A6Q9Y2P4 619 aa6.13□□□□□ -1.43
CXXC4-202ENST00000466963 LAMA2P24043 3122 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 SPATA31C1P0DKV0 1188 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 HMGA1P17096 107 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 RXRAP19793 462 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 BRCC3P46736 316 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 AP3M2P53677 418 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 LILRA4P59901 499 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 DUSP4Q13115 394 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 CTTNQ14247 550 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 KRT79Q5XKE5 535 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 IQCHQ86VS3 1027 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 TTC39CQ8N584 583 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 SGK2Q9HBY8 427 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 ARHGAP6O43182 974 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 CD6P30203 668 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 HMGN5P82970 282 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 CFHR1Q03591 330 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM132DQ14C87 1099 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 SLC10A6Q3KNW5 377 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 ARL6IP4Q66PJ3 421 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 STXBP4Q6ZWJ1 553 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 LIMS2Q7Z4I7 341 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 IFT43Q96FT9 208 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 B3GALT6Q96L58 329 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 HHIPQ96QV1 700 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 KDM4CQ9H3R0 1056 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 BCCIPQ9P287 314 aaKnown RBP eCLIP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 WRAP73Q9P2S5 460 aaPredicted RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 GDAQ9Y2T3 454 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 ACACBO00763 2458 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 K7EQS6 105 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 KAT7O95251 611 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 EIF2S3P41091 472 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 OPRD1P41143 372 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 NPTX2P47972 431 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 KCNC4Q03721 635 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF33AQ06730 810 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 INTS6LQ5JSJ4 861 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 C9orf57Q5W0N0 161 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 GRAMD4Q6IC98 578 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 CATSPER3Q86XQ3 398 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 NOSTRINQ8IVI9 506 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 MED8Q96G25 268 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 SLITRK1Q96PX8 696 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 PAAF1Q9BRP4 392 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 IL25Q9H293 177 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 PNPLA8Q9NP80 782 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 ITM2CQ9NQX7 267 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 RBM12Q9NTZ6 932 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 RGL1Q9NZL6 768 aa6.12□□□□□ -1.43
CXXC4-202ENST00000466963 LSM7Q9UK45 103 aaKnown RBP6.12□□□□□ -1.43
CXXC4-202ENST00000466963 IGHV1OR15-9A0A0B4J2B8 117 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 hCG_1642624A0A1W2PR95 340 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 TTLL13PA6NNM8 815 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 SEC24BO95487 1268 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ADH5P11766 374 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 GAP43P17677 238 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 MYO1EQ12965 1108 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 EEF1DP3Q658K8 133 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 USP30Q70CQ3 517 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF248Q8NDW4 579 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 C3orf58Q8NDZ4 430 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 SCFD1Q8WVM8 642 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 HPS3Q969F9 1004 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 TBATAQ96M53 351 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 JAKMIP1Q96N16 626 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 LRRC27Q9C0I9 530 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ELOVL4Q9GZR5 314 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ZDHHC4Q9NPG8 344 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 GTSE1Q9NYZ3 720 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 IL37Q9NZH6 218 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 DEC1Q9P2X7 70 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 PTPRDP23468 1912 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 CACNG3O60359 315 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 HUS1O60921 280 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 408.6 ms