RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 CNGA4Q8IV77 575 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 BAP1Q92560 729 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 SPATA17Q96L03 361 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 C8orf48Q96LL4 319 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 DUSP16Q9BY84 665 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 KRT82Q9NSB4 513 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 COG5Q9UP83 839 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 YIPF1Q9Y548 306 aa25.53■■□□□ 1.68
APOE-202ENST00000425718 BZW2Q9Y6E2 419 aaKnown RBP25.53■■□□□ 1.68
APOE-202ENST00000425718 ZNF638Q14966 1978 aaKnown RBP25.53■■□□□ 1.68
APOE-202ENST00000425718 O00370 1275 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 AP5Z1O43299 807 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 AP1G2O75843 785 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 GFPT2O94808 682 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 PAPLNO95428 1278 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 SETSIPP0DME0 302 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 NPR3P17342 541 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 CYP2F1P24903 491 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 ADORA2BP29275 332 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 KRT9P35527 623 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 ITIH3Q06033 890 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 BST2Q10589 180 aaKnown RBP25.52■■□□□ 1.68
APOE-202ENST00000425718 SKIV2LQ15477 1246 aaKnown RBP25.52■■□□□ 1.68
APOE-202ENST00000425718 TMC6Q7Z403 805 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 ZNF606Q8WXB4 792 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 UBXN6Q9BZV1 441 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 ZNF518BQ9C0D4 1074 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 AIPL1Q9NZN9 384 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 TSPAN16Q9UKR8 245 aa25.52■■□□□ 1.68
APOE-202ENST00000425718 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.52■■□□□ 1.68
APOE-202ENST00000425718 SEC24AO95486 1093 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 VNN2O95498 520 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 GYPCP04921 128 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 SPATA31D3P0C874 917 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 CSH1P0DML2 217 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 CSH2P0DML3 217 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 CYP11B1P15538 503 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 BRD2P25440 801 aaKnown RBP25.51■■□□□ 1.67
APOE-202ENST00000425718 GTF2F1P35269 517 aaKnown RBP eCLIP25.51■■□□□ 1.67
APOE-202ENST00000425718 TAF12Q16514 161 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 ASIC2Q16515 512 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 PTPN21Q16825 1174 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 CES5AQ6NT32 575 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 SPATA31D4Q6ZUB0 917 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 SCN4BQ8IWT1 228 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 DRC7Q8IY82 874 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 LEMD2Q8NC56 503 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 PDCL3Q9H2J4 239 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 CSNK1G1Q9HCP0 422 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 ZNHIT6Q9NWK9 470 aaKnown RBP25.51■■□□□ 1.67
APOE-202ENST00000425718 COMMD8Q9NX08 183 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 PCDHGC3Q9UN70 934 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 SLC27A5Q9Y2P5 690 aa25.51■■□□□ 1.67
APOE-202ENST00000425718 LRRC53A6NM62 1247 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 ADCY5O95622 1261 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 FGF19O95750 216 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 GLP2RO95838 553 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 SNX16P57768 344 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 TWF1Q12792 350 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 GOLGA7BQ2TAP0 167 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 EP400NLQ6ZTU2 488 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 SLC47A2Q86VL8 602 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 ZNF512Q96ME7 567 aaPredicted RBP25.5■■□□□ 1.67
APOE-202ENST00000425718 NOX5Q96PH1 765 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 PRKD2Q9BZL6 878 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 IMPACTQ9P2X3 320 aa25.5■■□□□ 1.67
APOE-202ENST00000425718 UXTQ9UBK9 157 aaPredicted RBP25.5■■□□□ 1.67
APOE-202ENST00000425718 CLDN5O00501 218 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 CASP14P31944 242 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 GSE1Q14687 1217 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 PPP1R2P3Q6NXS1 205 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 TRIM72Q6ZMU5 477 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 PAQR9Q6ZVX9 377 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 VN1R2Q8NFZ6 395 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 OR8K1Q8NGG5 319 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 MAFAQ8NHW3 353 aaPredicted RBP25.49■■□□□ 1.67
APOE-202ENST00000425718 EPS8L1Q8TE68 723 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 CPLX3Q8WVH0 158 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 LHX5Q9H2C1 402 aa25.49■■□□□ 1.67
APOE-202ENST00000425718 C2orf16Q68DN1 1984 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 CCDC195A0A1B0GUA6 201 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 M0QYV0 167 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 XPO1O14980 1071 aaKnown RBP25.48■■□□□ 1.67
APOE-202ENST00000425718 RTN3O95197 1032 aaPredicted RBP25.48■■□□□ 1.67
APOE-202ENST00000425718 PRKCIP41743 596 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 CCDC85BQ15834 202 aaPredicted RBP25.48■■□□□ 1.67
APOE-202ENST00000425718 CLEC20AQ6ZU45 233 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 VPS36Q86VN1 386 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 TFAP2BQ92481 460 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 HLA-CQ95604 372 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 LPIN3Q9BQK8 851 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 CRISPLD1Q9H336 500 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 PIDD1Q9HB75 910 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 CYLDQ9NQC7 956 aa25.48■■□□□ 1.67
APOE-202ENST00000425718 AKR1B15C9JRZ8 316 aaPredicted RBP25.47■■□□□ 1.67
APOE-202ENST00000425718 F8VP50 259 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 LINC01565O15544 149 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 MICAL2O94851 1124 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 LSM8O95777 96 aaKnown RBP25.47■■□□□ 1.67
APOE-202ENST00000425718 PNMA6AP0CW24 399 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms