RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 TFDP3Q5H9I0 405 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RAP1GAPP47736 663 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 ERFP50548 548 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 GTF2H3Q13889 308 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 TEX12Q9BXU0 123 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 WHRNQ9P202 907 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SUPT3HB4E1H0 165 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 PRPF4O43172 522 aaKnown RBP eCLIP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SUPT3HO75486 399 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 DENND5BQ6ZUT9 1274 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 EPS8L3Q8TE67 593 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 SLC5A5Q92911 643 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 CYP3A43Q9HB55 503 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RARGP13631 454 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 OCA2Q04671 838 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 TWF1Q12792 350 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 TDRD10Q5VZ19 366 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 NIPA1Q7RTP0 329 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 ARMC2Q8NEN0 867 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 DTX3LQ8TDB6 740 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 CPB2Q96IY4 423 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 CD274Q9NZQ7 290 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 A0A087WZ62 844 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 RAP1GDS1P52306 607 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-222ENST00000406454 F9P00740 461 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CEP70Q8NHQ1 597 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 YIPF3Q9GZM5 350 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 RUBCNLQ9H714 662 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 BLOC1S4Q9NUP1 217 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 B2RBV5 119 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CYB561D2O14569 222 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 BCAT1P54687 386 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 LAMTOR4Q0VGL1 99 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 OTOP1Q7RTM1 612 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CCNJLQ8IV13 435 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 EXD1Q8NHP7 514 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 MRGBPQ9NV56 204 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 VWA5AO00534 786 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 PTPN11Q06124 597 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 ARHGEF7Q14155 803 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 ADGRF2Q8IZF7 708 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 SPIRE2Q8WWL2 714 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 TMEM176AQ96HP8 235 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 DDX5P17844 614 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 C6orf10Q5SRN2 563 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 PTRHD1Q6GMV3 140 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 C11orf63Q6NUN7 778 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 LRRC34Q8IZ02 419 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 SPATA17Q96L03 361 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 COLEC11Q9BWP8 271 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 SPATC1LQ9H0A9 340 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 PKP3Q9Y446 797 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 EIF4E1BA6NMX2 242 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 B3GAT3O94766 335 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 TMED1Q13445 227 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 ABRAQ8N0Z2 381 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 SLC35C1Q96A29 364 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 OLFM3Q96PB7 478 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 RGS4P49798 205 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 LZICQ8WZA0 190 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CMTM5Q96DZ9 223 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 CNPY3Q9BT09 278 aa13.82□□□□□ -0.2
CACNA1C-222ENST00000406454 TMEM131LA2VDJ0 1609 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 STK25O00506 426 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 FRMPD4Q14CM0 1322 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
CACNA1C-222ENST00000406454 TATDN2Q93075 761 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms