RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CDH8P55286 799 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TNP2Q05952 138 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 USH1GQ495M9 461 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TTI2Q6NXR4 508 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 ZNF574Q6ZN55 896 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 DMRTC2Q8IXT2 367 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 ZNF619Q8N2I2 560 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SCAMP5Q8TAC9 235 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SHC3Q92529 594 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 NLRP4Q96MN2 994 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 YIPF2Q9BWQ6 316 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 RXFP1Q9HBX9 757 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 EPB41L4AQ9HCS5 686 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 SEPT10Q9P0V9 454 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CCNL1Q9UK58 526 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 PCDHGC5Q9Y5F6 944 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 MYBBP1AQ9BQG0 1328 aaKnown RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 AKR1B15C9JRZ8 316 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 SCAMP1O15126 338 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SIAH2O43255 324 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 LRIG2O94898 1065 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 UNC5CO95185 931 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SCGB1D1O95968 90 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 VIPP01282 170 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 GRPP07492 148 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 NPR1P16066 1061 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 RAP2BP61225 183 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 CTBSQ01459 385 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 GABPB1Q06547 395 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 RPA4Q13156 261 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 ZKSCAN8Q15776 578 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 PROSER3Q2NL68 480 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SGO2Q562F6 1265 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 NHSL2Q5HYW2 709 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 STEAP3Q658P3 488 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 E4F1Q66K89 784 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 UNQ6494/PRO21346Q6UXR6 183 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 OTOP2Q7RTS6 562 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TSPYL6Q8N831 410 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SLC17A8Q8NDX2 589 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 ADAMTS18Q8TE60 1221 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 WDR60Q8WVS4 1066 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PPP1R13BQ96KQ4 1090 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 ZNF558Q96NG5 402 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 GCNAQ96QF7 691 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 HS3ST6Q96QI5 342 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 RUFY1Q96T51 708 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TREX2Q9BQ50 279 aaPredicted RBP3.78□□□□□ -1.8
XRN1-202ENST00000392981 EPB41L1Q9H4G0 881 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 SMURF1Q9HCE7 757 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 TAS2R10Q9NYW0 307 aa3.78□□□□□ -1.8
XRN1-202ENST00000392981 PYCARD-AS1I3L0S3 204 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 HNRNPRO43390 633 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 LILRB5O75023 590 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GMNNO75496 209 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 WFS1O76024 890 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 PECAM1P16284 738 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 MAN2A2P49641 1150 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CDH15P55291 814 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 NFKBIBQ15653 356 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 C11orf88Q6PI97 169 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CYP20A1Q6UW02 462 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 LIAT1Q6ZQX7 453 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD35Q8N283 1001 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 FSIP1Q8NA03 581 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 MFSD2AQ8NA29 543 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GLIS1Q8NBF1 620 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ASPNQ9BXN1 380 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ITPAQ9BY32 194 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 EIF2AQ9BY44 585 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 SPON1Q9HCB6 807 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 TBCCD1Q9NVR7 557 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 RGL1Q9NZL6 768 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 SLC25A13Q9UJS0 675 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 R3HDM2Q9Y2K5 976 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 PCDHB6Q9Y5E3 794 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 KCNE2Q9Y6J6 123 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 BRCA2P51587 3418 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 LOC100289279A0A1B0GTE1 492 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 EME2A4GXA9 379 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 ZNF785A8K8V0 405 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ISM1B1AKI9 464 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 KIAA0355O15063 1070 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 SEPT4O43236 478 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 PIAS2O75928 621 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 PTPN1P18031 435 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 MAPK4P31152 587 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 RFC1P35251 1148 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 GP5P40197 560 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CSE1LP55060 971 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 SESN2P58004 480 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 TEFQ10587 303 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 COX10Q12887 443 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 NOLC1Q14978 699 aaKnown RBP eCLIP3.77□□□□□ -1.81
XRN1-202ENST00000392981 AMOTQ4VCS5 1084 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 HSP90B2PQ58FF3 399 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 NUP54Q7Z3B4 507 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ZER1Q7Z7L7 766 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ORAI3Q9BRQ5 295 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CLPBQ9H078 707 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms