RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 NFIXQ14938 502 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 TAF13Q15543 124 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 CYP2A13Q16696 494 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 HIBCHQ6NVY1 386 aaPredicted RBP4.14□□□□□ -1.75
UBR3-202ENST00000392632 PACS1Q6VY07 963 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 PALB2Q86YC2 1186 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 AHI1Q8N157 1196 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 CLCC1Q96S66 551 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 TCF25Q9BQ70 676 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 SENP7Q9BQF6 1050 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 HEMGNQ9BXL5 484 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 CAPN10Q9HC96 672 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 ZNF304Q9HCX3 659 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 DCP1AQ9NPI6 582 aaPredicted RBP4.14□□□□□ -1.75
UBR3-202ENST00000392632 MIEF1Q9NQG6 463 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 DNAJC5BQ9UF47 199 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 RUVBL2Q9Y230 463 aaKnown RBP4.14□□□□□ -1.75
UBR3-202ENST00000392632 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.14□□□□□ -1.75
UBR3-202ENST00000392632 AXIN2Q9Y2T1 843 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 PCDHB5Q9Y5E4 795 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 PCDHB2Q9Y5E7 798 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 NCAPD2Q15021 1401 aa4.14□□□□□ -1.75
UBR3-202ENST00000392632 A0A0G2JLW4 131 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CCDC85CA6NKD9 419 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MYO1GB0I1T2 1018 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 TMEM114B3SHH9 223 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 KCNN4O15554 427 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CYTH3O43739 400 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ZC3H11AO75152 810 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBR3-202ENST00000392632 SRP72O76094 671 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 NUDT14O95848 222 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 SLC2A4P14672 509 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MSH3P20585 1137 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 FGFR2P21802 821 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ATN1P54259 1190 aaPredicted RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 C21orf59P57076 290 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 IL2P60568 153 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 RAB14P61106 215 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ALDH6A1Q02252 535 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 COASYQ13057 564 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 TRIM28Q13263 835 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 ACAP2Q15057 778 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 TOMM20Q15388 145 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 DNAL1Q4LDG9 190 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 WLSQ5T9L3 541 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 C16orf89Q6UX73 402 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ZNF513Q8N8E2 541 aaPredicted RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 LINC00301Q8NCQ3 95 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 C3orf20Q8ND61 904 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MYRIPQ8NFW9 859 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 TDRD7Q8NHU6 1098 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 MYCBPAPQ8TBZ2 947 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 PANX3Q96QZ0 392 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 SH3GL3Q99963 347 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ECSITQ9BQ95 431 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 PHF20Q9BVI0 1012 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MOV10L1Q9BXT6 1211 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 GOLPH3Q9H4A6 298 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CCDC134Q9H6E4 229 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 WDCPQ9H6R7 721 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 SLC28A3Q9HAS3 691 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CYP4F11Q9HBI6 524 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 DDX28Q9NUL7 540 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 DNAJC11Q9NVH1 559 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 BARHL2Q9NY43 387 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 NOP53Q9NZM5 478 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 CHORDC1Q9UHD1 332 aaPredicted RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 IGSF1Q8N6C5 1336 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ARAP3Q8WWN8 1544 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 LGALS16A8MUM7 142 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CYP27B1O15528 508 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 PRKAB2O43741 272 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MGRN1O60291 552 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 AVILO75366 819 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 FGF19O95750 216 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 IGSF6O95976 241 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CHGBP05060 677 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CYP21A2P08686 494 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 PDGFRBP09619 1106 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 YY1P25490 414 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 STIP1P31948 543 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 GRK4P32298 578 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CHI3L1P36222 383 aaPredicted RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 MAPK9P45984 424 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 NPTX2P47972 431 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 NUP107P57740 925 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 XRCC4Q13426 336 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 C1DQ13901 141 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 LLGL1Q15334 1064 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 CCDC144BQ3MJ40 725 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ATP13A4Q4VNC1 1196 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 PAGE5Q96GU1 130 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 HPDLQ96IR7 371 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 MKNK1Q9BUB5 465 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 IDI2Q9BXS1 227 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 PRRG4Q9BZD6 226 aa4.13□□□□□ -1.75
UBR3-202ENST00000392632 UBE2OQ9C0C9 1292 aaKnown RBP4.13□□□□□ -1.75
UBR3-202ENST00000392632 FHDC1Q9C0D6 1143 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms