RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 BANF1O75531 89 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 TTC4O95801 387 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
HERC4-202ENST00000373700 DCAF6Q58WW2 860 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 TMEM192Q8IY95 271 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 C12orf29Q8N999 325 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 NETO2Q8NC67 525 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 CDT1Q9H211 546 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 UBN1Q9NPG3 1134 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 PRDM5Q9NQX1 630 aaPredicted RBP8.16□□□□□ -1.1
HERC4-202ENST00000373700 CACNG4Q9UBN1 327 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 ZC3H7BQ9UGR2 993 aaKnown RBP8.16□□□□□ -1.1
HERC4-202ENST00000373700 GYG2O15488 501 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 RGS20O76081 388 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 LCA5LO95447 670 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 HMBSP08397 361 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 SRGAP2BP0DMP2 458 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 AP3M2P53677 418 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 ZNF484Q5JVG2 852 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 MROH9Q5TGP6 573 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 PDZD4Q76G19 769 aaPredicted RBP8.16□□□□□ -1.1
HERC4-202ENST00000373700 ZNF677Q86XU0 584 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 ARHGAP24Q8N264 748 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 LRRC57Q8N9N7 239 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 APPL2Q8NEU8 664 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 LPPQ93052 612 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
HERC4-202ENST00000373700 DCLK3Q9C098 648 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 IFT122Q9HBG6 1241 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 SLC40A1Q9NP59 571 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 TXLNGQ9NUQ3 528 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 C10orf71Q711Q0 1435 aa8.16□□□□□ -1.1
HERC4-202ENST00000373700 DDX60Q8IY21 1712 aaKnown RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 CFLARO15519 480 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 PECAM1P16284 738 aaPredicted RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 SERPINB6P35237 376 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 CHKAP35790 457 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 OR1G1P47890 313 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 CPA2P48052 419 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 NOVP48745 357 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 NDST1P52848 882 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 TAS2R40P59535 323 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 GCNT1Q02742 428 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 TFDP3Q5H9I0 405 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 SPOCD1Q6ZMY3 1216 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 PACS2Q86VP3 889 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 RYBPQ8N488 228 aaPredicted RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 USP33Q8TEY7 942 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 R3HDM2Q9Y2K5 976 aaKnown RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 ARL2BPQ9Y2Y0 163 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 APOL1O14791 398 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 ARF4P18085 180 aaPredicted RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 RFC1P35251 1148 aaPredicted RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 GNL1P36915 607 aaPredicted RBP8.15□□□□□ -1.1
HERC4-202ENST00000373700 CPT1AP50416 773 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 ARFIP2P53365 341 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 KDSRQ06136 332 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 TAF11Q15544 211 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 KLHL38Q2WGJ6 581 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 NUDCD3Q8IVD9 361 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 SCUBE3Q8IX30 993 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 ADAM32Q8TC27 787 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 SHANK3Q9BYB0 1731 aa8.15□□□□□ -1.1
HERC4-202ENST00000373700 A0A0G2JLL6 359 aaPredicted RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 CRCPO75575 148 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 RECQL4O94761 1208 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 ACO1P21399 889 aaKnown RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 EPHB1P54762 984 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 NCKAP1LP55160 1127 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 MFSD10Q14728 455 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 FSCN1Q16658 493 aaKnown RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 PRRT2Q7Z6L0 340 aaPredicted RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 FAM131BQ86XD5 332 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 BRSK2Q8IWQ3 736 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 SAMD3Q8N6K7 520 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 SMC1BQ8NDV3 1235 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 FBXO36Q8NEA4 188 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 DTX3LQ8TDB6 740 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 ZC3H15Q8WU90 426 aaKnown RBP8.15□□□□□ -1.11
HERC4-202ENST00000373700 RXFP2Q8WXD0 754 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 PGBD4Q96DM1 585 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 GLT1D1Q96MS3 346 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 GAD1Q99259 594 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 SHCBP1LQ9BZQ2 653 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 CYP4F11Q9HBI6 524 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 PCMTD2Q9NV79 361 aa8.15□□□□□ -1.11
HERC4-202ENST00000373700 CEP290O15078 2479 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 KRT38O76015 456 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 UBOX5O94941 541 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 PTK7Q13308 1070 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 RNF139Q8WU17 664 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 EXT2Q93063 718 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 BHMTQ93088 406 aa8.14□□□□□ -1.11
HERC4-202ENST00000373700 CCDC124Q96CT7 223 aaKnown RBP8.14□□□□□ -1.11
HERC4-202ENST00000373700 NXF3Q9H4D5 531 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms