RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 LUZP2Q86TE4 346 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 NLNQ9BYT8 704 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 PALMDQ9NP74 551 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 DPYDQ12882 1025 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 KBTBD12Q3ZCT8 623 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 BOLA3Q53S33 107 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 CYP39A1Q9NYL5 469 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 KIF1BO60333 1816 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 TK2O00142 265 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 PSMD12O00232 456 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 PMPCBO75439 489 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 DDX39BQ13838 428 aaKnown RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 NAB2Q15742 525 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 CDK5RAP1Q96SZ6 601 aaKnown RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 SMARCAL1Q9NZC9 954 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 ZC3H11AO75152 810 aaKnown RBP eCLIP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 GCLCP48506 637 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 SMTNL2Q2TAL5 461 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 C17orf75Q9HAS0 396 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 SNX12Q9UMY4 172 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 YY1P25490 414 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 C3orf62Q6ZUJ4 267 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 KRT84Q9NSB2 600 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 GEMIN8Q9NWZ8 242 aaKnown RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 STMN3Q9NZ72 180 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 RNF103O00237 685 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 CLK1P49759 484 aaKnown RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 KPNA1P52294 538 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 HOMEZQ8IX15 550 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 IMPAD1Q9NX62 359 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 F9P00740 461 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 SRGNP10124 158 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 PWP1Q13610 501 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.22e-7■■□□□ 12.6
NUCKS1-201ENST00000367142 STARD7Q9NQZ5 370 aa16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
NUCKS1-201ENST00000367142 RHOCP08134 193 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 CHN1P15882 459 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 MAGEA4P43358 317 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 RHOAP61586 193 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 MTSS1LQ765P7 747 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ARMC2Q8NEN0 867 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ADAM33Q9BZ11 813 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 VPS28Q9UK41 221 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 KPNA6O60684 536 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 TMEM253P0C7T8 217 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 FAM71DQ8N9W8 422 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 FAR2Q96K12 515 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 FOXN1O15353 648 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 PDHBP11177 359 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 PTPAQ15257 358 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ADSSL1Q8N142 457 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 TMCC3Q9ULS5 477 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 IFRD1O00458 451 aaPredicted RBP16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ARHGAP17Q68EM7 881 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 CLPBQ9H078 707 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 ABCA8O94911 1581 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 CYB561D2O14569 222 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 B3GAT3O94766 335 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 MIB1Q86YT6 1006 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 SPIRE2Q8WWL2 714 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
NUCKS1-201ENST00000367142 H0YC42 278 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 FBXO21O94952 628 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 ACO1P21399 889 aaKnown RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 CCDC126Q96EE4 140 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 THUMPD3Q9BV44 507 aaKnown RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 UBE2OQ9C0C9 1292 aaKnown RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 MROH8Q9H579 483 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 ARMC7Q9H6L4 198 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 TBX20Q9UMR3 447 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 M0R3G1 203 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 CRTAMO95727 393 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 IFNA14P01570 189 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 TCN1P20061 433 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms