RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SLC34A1Q06495 639 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MMRN1Q13201 1228 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 NFIL3Q16649 462 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 WASHC2DQ5SRD0 308 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ATG16L1Q676U5 607 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RHBDF2Q6PJF5 856 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 UNC45BQ8IWX7 931 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 C4orf19Q8IY42 314 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 KCTD17Q8N5Z5 321 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ALLCQ8N6M5 410 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CERKQ8TCT0 537 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CRYGNQ8WXF5 182 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 E2F7Q96AV8 911 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PDCD2LQ9BRP1 358 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 VPS11Q9H270 941 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF395Q9H8N7 513 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SLC24A2Q9UI40 661 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 FZD1Q9UP38 647 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 FIS1Q9Y3D6 152 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SLC4A7Q9Y6M7 1214 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CCDC78A2IDD5 438 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 H0YCG3 227 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MTA2O94776 668 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 KRT7P08729 469 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SESN2P58004 480 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PGM5Q15124 567 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PARP6Q2NL67 630 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RINLQ6ZS11 566 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF677Q86XU0 584 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 LRRC71Q8N4P6 559 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF483Q8TF39 744 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 C10orf82Q8WW14 230 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF516Q92618 1163 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 OXNAD1Q96HP4 312 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 FOXP3Q9BZS1 431 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 NMUR2Q9GZQ4 415 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MIS12Q9H081 205 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CYP26B1Q9NR63 512 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CISHQ9NSE2 258 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 DDX56Q9NY93 547 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 LGALS13Q9UHV8 139 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 GRID1Q9ULK0 1009 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MYPNQ86TC9 1320 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SMCHD1A6NHR9 2005 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 GSC2O15499 205 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SNUPNO95149 360 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 OAS1P00973 400 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CD48P09326 243 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 UNGP13051 313 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SKIV2L2P42285 1042 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 BCAR1P56945 870 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ASPHQ12797 758 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PIGHQ14442 188 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ACSBG2Q5FVE4 666 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SLFN12LQ6IEE8 588 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ANKS1BQ7Z6G8 1248 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CCNJLQ8IV13 435 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 WDR75Q8IWA0 830 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TTC13Q8NBP0 860 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CCNYQ8ND76 341 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PYDC1Q8WXC3 89 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 USP6NLQ92738 828 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ATP2A3Q93084 1043 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PCDH9Q9HC56 1237 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ANKEF1Q9NU02 776 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PRKAG3Q9UGI9 489 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TCRBV7S3A2A0A539 114 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 C2CD2LO14523 706 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CYB561D2O14569 222 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 STK10O94804 968 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 LAMB1P07942 1786 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 GM2AP17900 193 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 MUTP22033 750 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TNFSF9P41273 254 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TUBP50607 506 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ACTR2P61160 394 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CDK16Q00536 496 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 BTKQ06187 659 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 STX3Q13277 289 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CUL3Q13618 768 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TRIP10Q15642 601 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 MSS51Q4VC12 460 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF667Q5HYK9 610 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 MON1BQ7L1V2 547 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZBTB8OSQ8IWT0 167 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 NME8Q8N427 588 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 RNF149Q8NC42 400 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 NETO2Q8NC67 525 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 WDR60Q8WVS4 1066 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PTPRN2Q92932 1015 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ANKRD36BP1Q96IX9 119 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms