RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 SCOCQ9UIL1 159 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 GMEB2Q9UKD1 530 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 PRMT3O60678 531 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 GLUD1P00367 558 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 PCNAP12004 261 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 XRCC4Q13426 336 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 ARID5BQ14865 1188 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 RIT2Q99578 217 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 CEP72Q9P209 647 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 SNX5Q9Y5X3 404 aa12.83□□□□□ -0.36
CACNA1F-201ENST00000323022 CA12O43570 354 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 TYK2P29597 1187 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 DDR1Q08345 913 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 LAMTOR4Q0VGL1 99 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 RALGDSQ12967 914 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 SBK1Q52WX2 424 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 RHOT1Q8IXI2 618 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ZMYND12Q9H0C1 365 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 RHBGQ9H310 441 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 PKD2L2Q9NZM6 624 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 PSMD3O43242 534 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 LARGE1O95461 756 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 MSH3P20585 1137 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 FKBP1BP68106 108 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 CREMQ03060 361 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ALS2CLQ60I27 953 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 NAT16Q8N8M0 369 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 HIPK4Q8NE63 616 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 WWOXQ9NZC7 414 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 TRIM16O95361 564 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ZBED6P86452 979 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 TMED1Q13445 227 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 MMGT1Q8N4V1 131 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 EDEM1Q92611 657 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 RPS6KB2Q9UBS0 482 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 NFU1Q9UMS0 254 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 PTPRAP18433 802 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 SCP2P22307 547 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 GPC1P35052 558 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 KRT31Q15323 416 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 MTFR1Q15390 333 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 COPS5Q92905 334 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 CDK5RAP1Q96SZ6 601 aaKnown RBP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ARP10275 920 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 YWHAQP27348 245 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 MLH1P40692 756 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 WASP42768 502 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 MORF4L2Q15014 288 aa12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 SMAD5Q99717 465 aaKnown RBP12.82□□□□□ -0.36
CACNA1F-201ENST00000323022 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 GPD1P21695 349 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 CENPCQ03188 943 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 OCA2Q04671 838 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PDIA2Q13087 525 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 TFAP2DQ7Z6R9 452 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PROM2Q8N271 834 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 CYTH2Q99418 400 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 RNF14Q9UBS8 474 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 APOBEC2Q9Y235 224 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 MRPS17Q9Y2R5 130 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 SPAG7O75391 227 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 AARSP49588 968 aaKnown RBP eCLIP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 C16orf72Q14CZ0 275 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 EPC2Q52LR7 807 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 MB21D2Q8IYB1 491 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 ZMAT2Q96NC0 199 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PCMTD2Q9NV79 361 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 ZFATQ9P243 1243 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 TMX2Q9Y320 296 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 DYRK1BQ9Y463 629 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PVALEFA0A1B0GWK0 134 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 NCF1BA6NI72 391 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 NCF1CA8MVU1 366 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PODXLO00592 558 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 SLC9A3R1O14745 358 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 APRTP07741 180 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 NCF1P14598 390 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 SOX11P35716 441 aa12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 MRPS25P82663 173 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 SLC44A2Q8IWA5 706 aaPredicted RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 TMA16Q96EY4 203 aaKnown RBP12.81□□□□□ -0.36
CACNA1F-201ENST00000323022 PAWRQ96IZ0 340 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms