RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Sytl1Q99N80 567 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 DcpsQ9DAR7 338 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 1700031M16RikA0A087WSH0 82 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Srpk1O70551 648 aaKnown RBP16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tsta3P23591 321 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tdrd5Q5VCS6 1040 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 B3glctQ8BHT6 489 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tgif2lx2Q8K5B9 231 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Coq6Q8R1S0 476 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pofut2Q8VHI3 429 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kdm4bQ91VY5 1086 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 ChiaQ91XA9 473 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gbp7Q91Z40 638 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Psmd9Q9CR00 222 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Serpinb3bQ9D1Q5 387 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Dnajb7Q9QYI8 312 aa16.94■□□□□ 0.3
Trim28-201ENSMUST00000005705 Myo18aQ9JMH9 2050 aaKnown RBP16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Disp2Q8CIP5 1345 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gm29133A0A1B0GT72 266 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Raph1F2Z3U3 1266 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kcna3P16390 528 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pms2P54279 859 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 RalgdsQ03385 852 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Slc17a7Q3TXX4 560 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Fdxacb1Q3UY23 622 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Cd180Q62192 661 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Glra2Q7TNC8 452 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Fam163bQ8BUM6 167 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Syt15Q8C6N3 418 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ccdc159Q8C963 411 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ccdc130Q9D516 385 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Diaph3Q9Z207 1171 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gm3460E9QAI8 215 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Impdh2P24547 514 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Hsd17b2P51658 381 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rhox5P52651 210 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mfsd14aP70187 490 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Usp1Q8BJQ2 784 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Phka2Q8BWJ3 1235 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ccser1Q8C0C4 895 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Armcx6Q8K3A6 301 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tasp1Q8R1G1 420 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Cdc26Q99JP4 85 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rpa3Q9CQ71 121 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Sugt1Q9CX34 336 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mphosph6Q9D1Q1 161 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Spata1Q9D5R4 444 aa16.93■□□□□ 0.3
Trim28-201ENSMUST00000005705 Zfp990B1AVN5 605 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mov10P23249 1004 aaKnown RBP16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 HdcP23738 662 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Slc1a2P43006 572 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gbp8Q2V6D6 525 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mylk3Q3UIZ8 795 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ampd1Q3V1D3 745 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Nt5c2Q3V1L4 560 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kctd8Q50H33 476 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 PapolaQ61183 739 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rgl2Q61193 778 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Senp7Q8BUH8 1037 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Trim35Q8C006 501 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Lrif1Q8CDD9 755 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ndfip2Q91ZP6 311 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 HnrnpcQ9Z204 313 aaKnown RBP16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Vmn2r25W4VSP2 855 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pds5aQ6A026 1332 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Znf536Q8K083 1302 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rps6ka3P18654 740 aaKnown RBP16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 CstaP56567 97 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Npas2P97460 816 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Edem3Q2HXL6 931 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Phactr1Q2M3X8 580 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Moxd2Q7TT41 619 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 TdrkhQ80VL1 560 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Slitrk1Q810C1 696 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tmco6Q8BQX5 494 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Anapc5Q8BTZ4 740 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Robo4Q8C310 1012 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Stard7Q8R1R3 373 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Snap47Q8R570 413 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Foxp3Q99JB6 429 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 1700129C05RikQ9CQ77 218 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Bace2Q9JL18 514 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Magea8O89012 320 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Vav1P27870 845 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Cbx2P30658 519 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Sash1P59808 1230 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Map4k1P70218 827 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Frg1P97376 258 aaKnown RBP16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Cage1Q5IR70 849 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pik3r5Q5SW28 871 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Zfp943Q6NZP4 507 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Fam102aQ78T81 392 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 FsbpQ8BKE5 299 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kat14Q8CID0 779 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Txndc12Q9CQU0 170 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Castor1Q9CWQ8 331 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Xpo7Q9EPK7 1087 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tmod2Q9JKK7 351 aa16.92■□□□□ 0.3
Trim28-201ENSMUST00000005705 Itgb4A2A863 1818 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Abcb11Q9QY30 1321 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms