RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	DDI2	P0CH63	225 aa		4.06	□□□□□ -1.76
CSL4	YNL232W	DDI3	P0CH64	225 aa		4.06	□□□□□ -1.76
CSL4	YNL232W	MRP2	P10663	115 aa	Predicted RBP	4.06	□□□□□ -1.76
CSL4	YNL232W	PAN3	P36102	679 aa	Predicted RBP	4.06	□□□□□ -1.76
CSL4	YNL232W	YNL200C	P40165	246 aa	Known RBP	4.06	□□□□□ -1.76
CSL4	YNL232W	HAC1	P41546	238 aa		4.06	□□□□□ -1.76
CSL4	YNL232W	GPI2	P46961	280 aa		4.06	□□□□□ -1.76
CSL4	YNL232W	YJL027C	P47063	138 aa	Predicted RBP	4.06	□□□□□ -1.76
CSL4	YNL232W	YGR025W	P53216	100 aa		4.06	□□□□□ -1.76
CSL4	YNL232W	UTP23	Q12339	254 aa	Known RBP	4.06	□□□□□ -1.76
CSL4	YNL232W	GCN3	P14741	305 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	TIR2	P33890	251 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	YJR015W	P47090	510 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	LSM8	P47093	109 aa	Known RBP	4.05	□□□□□ -1.76
CSL4	YNL232W	TPN1	P53099	579 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	EST3	Q03096	181 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	MRPS8	Q03799	155 aa		4.05	□□□□□ -1.76
CSL4	YNL232W	ANB1	P19211	157 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	FMT1	P32785	401 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	SPT4	P32914	102 aa	Predicted RBP	4.04	□□□□□ -1.76
CSL4	YNL232W	KTI12	P34253	313 aa	Known RBP	4.04	□□□□□ -1.76
CSL4	YNL232W	PEX22	P39718	180 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	YNL184C	P53876	108 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	YMR320W	Q04897	101 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	FCF2	Q12035	217 aa	Predicted RBP	4.04	□□□□□ -1.76
CSL4	YNL232W	ATG5	Q12380	294 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	YNL146C-A	Q3E7Z1	64 aa		4.04	□□□□□ -1.76
CSL4	YNL232W	YJL197C-A	P0C5P0	93 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	CNB1	P25296	175 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	CDC50	P25656	391 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	YBL071C	P38185	102 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	YPC1	P38298	316 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	LAG1	P38703	411 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	MIG3	P39943	394 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	YER135C	P40082	130 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	LCB3	P47013	409 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	UBC12	P52491	188 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	COF1	Q03048	143 aa	Known RBP	4.03	□□□□□ -1.76
CSL4	YNL232W	TMA23	Q03525	211 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	KEI1	Q06346	221 aa		4.03	□□□□□ -1.76
CSL4	YNL232W	RNP1	P32385	249 aa		4.02	□□□□□ -1.77
CSL4	YNL232W	MRPL27	P36526	146 aa	Predicted RBP	4.02	□□□□□ -1.77
CSL4	YNL232W	YEA4	P40004	342 aa		4.02	□□□□□ -1.77
CSL4	YNL232W	THI74	Q04083	370 aa		4.02	□□□□□ -1.77
CSL4	YNL232W	SYM1	Q06563	197 aa		4.02	□□□□□ -1.77
CSL4	YNL232W	FSF1	Q12029	327 aa	Known RBP	4.02	□□□□□ -1.77
CSL4	YNL232W	PRM4	Q12498	284 aa		4.02	□□□□□ -1.77
CSL4	YNL232W	RPL42A	P0CX27	106 aa	Known RBP	4.01	□□□□□ -1.77
CSL4	YNL232W	RPL42B	P0CX28	106 aa	Known RBP	4.01	□□□□□ -1.77
CSL4	YNL232W	RPS11A	P0CX47	156 aa	Known RBP	4.01	□□□□□ -1.77
CSL4	YNL232W	RPS11B	P0CX48	156 aa	Known RBP	4.01	□□□□□ -1.77
CSL4	YNL232W	YCR022C	P25620	114 aa		4.01	□□□□□ -1.77
CSL4	YNL232W	AVT5	P38176	459 aa		4.01	□□□□□ -1.77
CSL4	YNL232W	YPS5	P53057	165 aa		4.01	□□□□□ -1.77
CSL4	YNL232W	YGR018C	P53211	109 aa		4.01	□□□□□ -1.77
CSL4	YNL232W	ERP1	Q05359	219 aa	Known RBP	4.01	□□□□□ -1.77
CSL4	YNL232W	UBI4	P0CG63	381 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	YHR213W	P0CI67	198 aa		4	□□□□□ -1.77
CSL4	YNL232W	RPL2A	P0CX45	254 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	RPL2B	P0CX46	254 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	URA5	P13298	226 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	SEC59	P20048	519 aa		4	□□□□□ -1.77
CSL4	YNL232W	YCR007C	P25354	239 aa		4	□□□□□ -1.77
CSL4	YNL232W	APS1	P35181	156 aa		4	□□□□□ -1.77
CSL4	YNL232W	HTD2	P38790	280 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	NSA2	P40078	261 aa	Known RBP	4	□□□□□ -1.77
CSL4	YNL232W	CAT5	P41735	233 aa		4	□□□□□ -1.77
CSL4	YNL232W	SHH4	Q06236	168 aa		4	□□□□□ -1.77
CSL4	YNL232W	SCP1	Q08873	200 aa		4	□□□□□ -1.77
CSL4	YNL232W	YPL162C	Q12042	273 aa		4	□□□□□ -1.77
CSL4	YNL232W	YMR230W-A	Q3E7B5	62 aa		4	□□□□□ -1.77
CSL4	YNL232W	SEC4	P07560	215 aa	Known RBP	3.99	□□□□□ -1.77
CSL4	YNL232W	RPF1	P38805	295 aa	Known RBP	3.99	□□□□□ -1.77
CSL4	YNL232W	YIR035C	P40579	254 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	YGR039W	P53225	103 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	YGR050C	P53231	118 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	HHO1	P53551	258 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	HST4	P53688	370 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	BET5	Q03630	159 aa		3.99	□□□□□ -1.77
CSL4	YNL232W	GPX2	P38143	162 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	POP8	P38208	133 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	CSH1	P38287	376 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	OST2	P46964	130 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	AIM25	P47140	327 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	FMP41	P53889	259 aa	Known RBP	3.98	□□□□□ -1.77
CSL4	YNL232W	LSM7	P53905	115 aa	Known RBP	3.98	□□□□□ -1.77
CSL4	YNL232W	AIM11	P87275	137 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	YDR366C	P87287	132 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	LOA1	Q06508	300 aa		3.98	□□□□□ -1.77
CSL4	YNL232W	VAR1	P02381	398 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	PRE1	P22141	198 aa	Known RBP	3.97	□□□□□ -1.77
CSL4	YNL232W	IRC22	P40006	225 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	YFL067W	P43537	175 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	IMP2	P46972	177 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	YPR063C	Q12160	140 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	YPS3	Q12303	508 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	YLR118C	Q12354	227 aa		3.97	□□□□□ -1.77
CSL4	YNL232W	FMP49	A0A023PZB3	126 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	SPS2	P08459	502 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	YPL073C	P40323	161 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms