RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W SFT2P38166 215 aa0.55□□□□□ -2.32
DDR48YMR173W YMR141CP40211 102 aa0.55□□□□□ -2.32
DDR48YMR173W HHO1P53551 258 aa0.55□□□□□ -2.32
DDR48YMR173W YPL067CQ02754 198 aa0.55□□□□□ -2.32
DDR48YMR173W YMR122CQ03879 124 aa0.55□□□□□ -2.32
DDR48YMR173W CSN9Q03981 162 aa0.55□□□□□ -2.32
DDR48YMR173W LDB18Q07887 179 aa0.55□□□□□ -2.32
DDR48YMR173W PFY1P07274 126 aa0.54□□□□□ -2.32
DDR48YMR173W YHR213WP0CI67 198 aa0.54□□□□□ -2.32
DDR48YMR173W NMT1P14743 455 aa0.54□□□□□ -2.32
DDR48YMR173W CDC39P25655 2108 aaKnown RBP0.54□□□□□ -2.32
DDR48YMR173W MRPL11P36521 249 aaPredicted RBP0.54□□□□□ -2.32
DDR48YMR173W YAP3P38749 330 aa0.54□□□□□ -2.32
DDR48YMR173W HSP10P38910 106 aa0.54□□□□□ -2.32
DDR48YMR173W GIM4P40005 111 aaKnown RBP0.54□□□□□ -2.32
DDR48YMR173W LST8P41318 303 aa0.54□□□□□ -2.32
DDR48YMR173W EMC4P53073 190 aa0.54□□□□□ -2.32
DDR48YMR173W YGR017WP53210 297 aa0.54□□□□□ -2.32
DDR48YMR173W COA4Q05809 96 aa0.54□□□□□ -2.32
DDR48YMR173W YOR385WQ08909 290 aa0.54□□□□□ -2.32
DDR48YMR173W DDP1Q99321 188 aaKnown RBP0.54□□□□□ -2.32
DDR48YMR173W YOR1P53049 1477 aa0.54□□□□□ -2.32
DDR48YMR173W MPC1P53157 130 aaKnown RBP0.53□□□□□ -2.32
DDR48YMR173W YMR321CQ04898 105 aa0.53□□□□□ -2.32
DDR48YMR173W YLR296WQ05898 108 aa0.53□□□□□ -2.32
DDR48YMR173W RPL40AP0CH08 128 aaKnown RBP0.52□□□□□ -2.33
DDR48YMR173W RPL40BP0CH09 128 aaKnown RBP0.52□□□□□ -2.33
DDR48YMR173W ELC1Q03071 99 aa0.52□□□□□ -2.33
DDR48YMR173W SPC3Q12133 184 aa0.52□□□□□ -2.33
DDR48YMR173W GTT2Q12390 233 aa0.52□□□□□ -2.33
DDR48YMR173W HSL1P34244 1518 aa0.52□□□□□ -2.33
DDR48YMR173W UBR1P19812 1950 aa0.51□□□□□ -2.33
DDR48YMR173W YCR050CP25630 102 aa0.51□□□□□ -2.33
DDR48YMR173W QCR10P37299 77 aa0.51□□□□□ -2.33
DDR48YMR173W MIC27P50945 234 aa0.51□□□□□ -2.33
DDR48YMR173W SDH7Q04401 133 aa0.51□□□□□ -2.33
DDR48YMR173W FCF2Q12035 217 aaPredicted RBP0.51□□□□□ -2.33
DDR48YMR173W HUG1Q6Q5K6 68 aa0.51□□□□□ -2.33
DDR48YMR173W RPL36BO14455 100 aaKnown RBP0.5□□□□□ -2.33
DDR48YMR173W RPL36AP05745 100 aaPredicted RBP0.5□□□□□ -2.33
DDR48YMR173W PAU21P0CE86 164 aa0.5□□□□□ -2.33
DDR48YMR173W PAU22P0CE87 164 aa0.5□□□□□ -2.33
DDR48YMR173W RPL43AP0CX25 92 aaKnown RBP0.5□□□□□ -2.33
DDR48YMR173W RPL43BP0CX26 92 aa0.5□□□□□ -2.33
DDR48YMR173W RPL14AP36105 138 aaKnown RBP0.5□□□□□ -2.33
DDR48YMR173W PRS3P38689 320 aaKnown RBP0.5□□□□□ -2.33
DDR48YMR173W RPL14BP38754 138 aaKnown RBP0.5□□□□□ -2.33
DDR48YMR173W YAL064WP39711 94 aa0.5□□□□□ -2.33
DDR48YMR173W HPM1P40481 377 aa0.5□□□□□ -2.33
DDR48YMR173W BRP1P53194 125 aa0.5□□□□□ -2.33
DDR48YMR173W TVP18Q04767 167 aa0.5□□□□□ -2.33
DDR48YMR173W NKP2Q06162 153 aa0.5□□□□□ -2.33
DDR48YMR173W HFA1P32874 2273 aa0.5□□□□□ -2.33
DDR48YMR173W SNT2P53127 1403 aa0.49□□□□□ -2.33
DDR48YMR173W YSF3P0C074 85 aaPredicted RBP0.49□□□□□ -2.33
DDR48YMR173W GSP1P32835 219 aaKnown RBP0.49□□□□□ -2.33
DDR48YMR173W YBR013CP38215 129 aa0.49□□□□□ -2.33
DDR48YMR173W AIM18P38884 321 aa0.49□□□□□ -2.33
DDR48YMR173W CNL1Q06333 122 aa0.49□□□□□ -2.33
DDR48YMR173W HPA2Q06592 156 aa0.49□□□□□ -2.33
DDR48YMR173W FIT3Q08907 204 aa0.49□□□□□ -2.33
DDR48YMR173W MRPL31P14063 131 aaPredicted RBP0.48□□□□□ -2.33
DDR48YMR173W SUA7P29055 345 aaPredicted RBP0.48□□□□□ -2.33
DDR48YMR173W HYM1P32464 399 aa0.48□□□□□ -2.33
DDR48YMR173W SRX1P36077 127 aa0.48□□□□□ -2.33
DDR48YMR173W PHS1P40857 217 aa0.48□□□□□ -2.33
DDR48YMR173W ERV14P53173 138 aa0.48□□□□□ -2.33
DDR48YMR173W YNL277W-AQ3E7Z0 62 aa0.48□□□□□ -2.33
DDR48YMR173W YLR307C-AQ3E825 87 aa0.48□□□□□ -2.33
DDR48YMR173W Q0144Q9ZZW2 109 aa0.48□□□□□ -2.33
DDR48YMR173W PRP8P33334 2413 aaKnown RBP0.47□□□□□ -2.33
DDR48YMR173W YLR157W-EP0CF00 54 aa0.47□□□□□ -2.33
DDR48YMR173W SEC59P20048 519 aa0.47□□□□□ -2.33
DDR48YMR173W EMP24P32803 203 aaKnown RBP0.47□□□□□ -2.33
DDR48YMR173W AIM4P38305 123 aaPredicted RBP0.47□□□□□ -2.33
DDR48YMR173W CYC2P38909 366 aa0.47□□□□□ -2.33
DDR48YMR173W POR2P40478 281 aa0.47□□□□□ -2.33
DDR48YMR173W YGR042WP53227 271 aa0.47□□□□□ -2.33
DDR48YMR173W SAE3P89114 91 aa0.47□□□□□ -2.33
DDR48YMR173W ARL3Q02804 198 aa0.47□□□□□ -2.33
DDR48YMR173W YOR034C-AQ3E735 80 aa0.47□□□□□ -2.33
DDR48YMR173W RPS20P38701 121 aaKnown RBP0.46□□□□□ -2.34
DDR48YMR173W YGL204CP53089 101 aa0.46□□□□□ -2.34
DDR48YMR173W ENV10Q99382 181 aa0.46□□□□□ -2.34
DDR48YMR173W TY4B-JP47024 1803 aa0.45□□□□□ -2.34
DDR48YMR173W RTC6O14464 93 aa0.45□□□□□ -2.34
DDR48YMR173W POP7P38291 140 aa0.45□□□□□ -2.34
DDR48YMR173W YIL163CP40448 117 aa0.45□□□□□ -2.34
DDR48YMR173W SPC2Q04969 178 aa0.45□□□□□ -2.34
DDR48YMR173W YDR278CQ05612 105 aa0.45□□□□□ -2.34
DDR48YMR173W FRQ1Q06389 190 aa0.45□□□□□ -2.34
DDR48YMR173W GSC2P40989 1895 aa0.45□□□□□ -2.34
DDR48YMR173W RPL22AP05749 121 aaKnown RBP0.44□□□□□ -2.34
DDR48YMR173W YJR128WP47162 119 aa0.44□□□□□ -2.34
DDR48YMR173W DYN2Q02647 92 aa0.44□□□□□ -2.34
DDR48YMR173W GPI19Q04082 140 aa0.44□□□□□ -2.34
DDR48YMR173W MRP49P32388 137 aa0.43□□□□□ -2.34
DDR48YMR173W YKL044WP36092 106 aa0.43□□□□□ -2.34
DDR48YMR173W SNF11P38956 169 aa0.43□□□□□ -2.34
DDR48YMR173W SFT1P43682 97 aa0.43□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms