RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C YCH1P42937 148 aa2.63□□□□□ -1.99
VPS33YLR396C OST2P46964 130 aa2.63□□□□□ -1.99
VPS33YLR396C PGU1P47180 361 aa2.63□□□□□ -1.99
VPS33YLR396C YGL118CP53132 145 aa2.63□□□□□ -1.99
VPS33YLR396C BRP1P53194 125 aa2.63□□□□□ -1.99
VPS33YLR396C TPC1P53257 314 aa2.63□□□□□ -1.99
VPS33YLR396C VPS71Q03433 280 aa2.63□□□□□ -1.99
VPS33YLR396C YPL229WQ99395 206 aa2.63□□□□□ -1.99
VPS33YLR396C HEM4P06174 275 aa2.62□□□□□ -1.99
VPS33YLR396C MRS1P07266 363 aa2.62□□□□□ -1.99
VPS33YLR396C ARP3P47117 449 aaKnown RBP2.62□□□□□ -1.99
VPS33YLR396C YNR064CP53750 290 aa2.62□□□□□ -1.99
VPS33YLR396C POP3P53833 195 aaPredicted RBP2.62□□□□□ -1.99
VPS33YLR396C HUG1Q6Q5K6 68 aa2.62□□□□□ -1.99
VPS33YLR396C ATG40Q99325 256 aa2.62□□□□□ -1.99
VPS33YLR396C FLO9P39712 1322 aa2.62□□□□□ -1.99
VPS33YLR396C VAR1P02381 398 aa2.62□□□□□ -1.99
VPS33YLR396C QRI5P32344 111 aa2.62□□□□□ -1.99
VPS33YLR396C MCH2P36032 473 aa2.62□□□□□ -1.99
VPS33YLR396C ATX1P38636 73 aa2.62□□□□□ -1.99
VPS33YLR396C SNF11P38956 169 aa2.62□□□□□ -1.99
VPS33YLR396C TVP23P38962 199 aa2.62□□□□□ -1.99
VPS33YLR396C SEC72P39742 193 aaKnown RBP2.62□□□□□ -1.99
VPS33YLR396C DSK2P48510 373 aa2.62□□□□□ -1.99
VPS33YLR396C DPP1Q05521 289 aa2.62□□□□□ -1.99
VPS33YLR396C YPQ1Q12010 308 aa2.62□□□□□ -1.99
VPS33YLR396C PRP46Q12417 451 aaPredicted RBP2.62□□□□□ -1.99
VPS33YLR396C YBL112CQ3E7Y4 105 aa2.62□□□□□ -1.99
VPS33YLR396C YLR365WQ7LIF2 110 aa2.62□□□□□ -1.99
VPS33YLR396C IES6P32617 166 aa2.61□□□□□ -1.99
VPS33YLR396C DER1P38307 211 aa2.61□□□□□ -1.99
VPS33YLR396C CUP9P41817 306 aa2.61□□□□□ -1.99
VPS33YLR396C SDS23P53172 527 aa2.61□□□□□ -1.99
VPS33YLR396C SUR7P54003 302 aa2.61□□□□□ -1.99
VPS33YLR396C YLR296WQ05898 108 aa2.61□□□□□ -1.99
VPS33YLR396C GRE1Q08969 168 aa2.61□□□□□ -1.99
VPS33YLR396C YPR108W-AQ3E7B3 70 aa2.61□□□□□ -1.99
VPS33YLR396C GAL7P08431 366 aa2.61□□□□□ -1.99
VPS33YLR396C RPL23AP0CX41 137 aaKnown RBP2.61□□□□□ -1.99
VPS33YLR396C RPL23BP0CX42 137 aaKnown RBP2.61□□□□□ -1.99
VPS33YLR396C HMRA1P0CY11 126 aa2.61□□□□□ -1.99
VPS33YLR396C CPT1P17898 393 aa2.61□□□□□ -1.99
VPS33YLR396C MRPS5P33759 307 aa2.61□□□□□ -1.99
VPS33YLR396C RPB7P34087 171 aa2.61□□□□□ -1.99
VPS33YLR396C SRX1P36077 127 aa2.61□□□□□ -1.99
VPS33YLR396C YER121WP40076 114 aa2.61□□□□□ -1.99
VPS33YLR396C IGD1P43598 195 aa2.61□□□□□ -1.99
VPS33YLR396C VEL1P53058 206 aa2.61□□□□□ -1.99
VPS33YLR396C YGR050CP53231 118 aa2.61□□□□□ -1.99
VPS33YLR396C PAM18Q07914 168 aa2.61□□□□□ -1.99
VPS33YLR396C DGA1Q08650 418 aa2.61□□□□□ -1.99
VPS33YLR396C YKL023C-AQ2V2P3 75 aa2.61□□□□□ -1.99
VPS33YLR396C TOM1Q03280 3268 aa2.61□□□□□ -1.99
VPS33YLR396C MXR2P25566 168 aa2.6□□□□□ -1.99
VPS33YLR396C CDC39P25655 2108 aaKnown RBP2.6□□□□□ -1.99
VPS33YLR396C YIL089WP40500 205 aa2.6□□□□□ -1.99
VPS33YLR396C GEP7P53171 287 aa2.6□□□□□ -1.99
VPS33YLR396C YLR460CP54007 376 aa2.6□□□□□ -1.99
VPS33YLR396C YOL029CQ08187 201 aa2.6□□□□□ -1.99
VPS33YLR396C FIT3Q08907 204 aa2.6□□□□□ -1.99
VPS33YLR396C YOR343CQ12484 108 aa2.6□□□□□ -1.99
VPS33YLR396C YMR316C-AI2HB70 103 aa2.59□□□□□ -1.99
VPS33YLR396C NHP2P32495 156 aaPredicted RBP2.59□□□□□ -1.99
VPS33YLR396C GPI18P38211 433 aa2.59□□□□□ -1.99
VPS33YLR396C YFR054CP43622 192 aa2.59□□□□□ -1.99
VPS33YLR396C YJL118WP47022 219 aa2.59□□□□□ -1.99
VPS33YLR396C YPS5P53057 165 aa2.59□□□□□ -1.99
VPS33YLR396C MIX17Q03667 156 aa2.59□□□□□ -1.99
VPS33YLR396C SDH7Q04401 133 aa2.59□□□□□ -1.99
VPS33YLR396C GTO3Q04806 366 aa2.59□□□□□ -1.99
VPS33YLR396C MIM1Q08176 113 aa2.59□□□□□ -1.99
VPS33YLR396C YOL118CQ08259 102 aa2.59□□□□□ -1.99
VPS33YLR396C MRPL20P22354 195 aaPredicted RBP2.59□□□□□ -2
VPS33YLR396C MIC12P38341 106 aa2.59□□□□□ -2
VPS33YLR396C YHR180WP38868 163 aa2.59□□□□□ -2
VPS33YLR396C YER076CP40049 302 aa2.59□□□□□ -2
VPS33YLR396C NCE101Q02820 53 aa2.59□□□□□ -2
VPS33YLR396C ECM18Q04623 453 aa2.59□□□□□ -2
VPS33YLR396C YOR292CQ08743 309 aa2.59□□□□□ -2
VPS33YLR396C YOR376WQ08900 122 aa2.59□□□□□ -2
VPS33YLR396C YDL180WQ12301 547 aa2.59□□□□□ -2
VPS33YLR396C DFM1Q12743 341 aaKnown RBP2.59□□□□□ -2
VPS33YLR396C PHO85P17157 305 aa2.58□□□□□ -2
VPS33YLR396C MRPL24P36525 258 aaPredicted RBP2.58□□□□□ -2
VPS33YLR396C PRS4P38063 326 aaPredicted RBP2.58□□□□□ -2
VPS33YLR396C SFT2P38166 215 aa2.58□□□□□ -2
VPS33YLR396C HUA1P40325 198 aa2.58□□□□□ -2
VPS33YLR396C SBH2P52871 88 aa2.58□□□□□ -2
VPS33YLR396C YGR039WP53225 103 aa2.58□□□□□ -2
VPS33YLR396C MSA1Q08471 629 aa2.58□□□□□ -2
VPS33YLR396C YOR192C-CQ3E736 78 aa2.58□□□□□ -2
VPS33YLR396C KRE1P17260 313 aa2.57□□□□□ -2
VPS33YLR396C YKL044WP36092 106 aa2.57□□□□□ -2
VPS33YLR396C YGR018CP53211 109 aa2.57□□□□□ -2
VPS33YLR396C YIL014C-AQ02598 104 aa2.57□□□□□ -2
VPS33YLR396C API2Q04413 109 aa2.57□□□□□ -2
VPS33YLR396C YOR186WQ08560 144 aa2.57□□□□□ -2
VPS33YLR396C YER039C-AP0CD97 72 aa2.57□□□□□ -2
VPS33YLR396C RPA12P32529 125 aaKnown RBP2.57□□□□□ -2
VPS33YLR396C FZF1P32805 299 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 115 ms