RNA–Protein interactions for RNA: YLR371W

ROM2, Transcript of GDP/GTP exchange factor (GEF) for Rho1p and Rho2p, yeast

Gene ROM2, Length 4,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROM2	YLR371W	SMB1	P40018	196 aa	Known RBP	0.84	□□□□□ -2.28
ROM2	YLR371W	ATG18	P43601	500 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	FIP1	P45976	327 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	APJ1	P53940	528 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	MIX17	Q03667	156 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	HNT1	Q04344	158 aa	Known RBP	0.84	□□□□□ -2.28
ROM2	YLR371W	SHH3	Q04487	196 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	SHH4	Q06236	168 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YPR108W-A	Q3E7B3	70 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.84	□□□□□ -2.28
ROM2	YLR371W	YNL277W-A	Q3E7Z0	62 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YLR365W	Q7LIF2	110 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	ODC2	Q99297	307 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	COS8	P38723	381 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	CTR2	P38865	189 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YIR020C	P40575	100 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YGL262W	P53054	175 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YPL077C	Q02831	240 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	THI74	Q04083	370 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	YDR114C	Q04597	100 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	MRX9	Q07349	420 aa	Known RBP	0.84	□□□□□ -2.28
ROM2	YLR371W	DGA1	Q08650	418 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	SUS1	Q6WNK7	96 aa		0.84	□□□□□ -2.28
ROM2	YLR371W	RPL39	P04650	51 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	ERG2	P32352	222 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
ROM2	YLR371W	PRS3	P38689	320 aa	Known RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	ECM14	P38836	430 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	HPA3	P39979	161 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	DLS1	P40366	167 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	TIR3	P40552	269 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	MST27	P53176	234 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	ABF2	Q02486	183 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	FIT1	Q04433	528 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	PAU23	Q07987	124 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	PAU17	Q12370	124 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	YER078W-A	Q3E7A2	54 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	MSW1	P04803	379 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	PRE1	P22141	198 aa	Known RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	PAU15	P40585	124 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	SPG1	P50088	95 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	VBA1	Q04301	562 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	MGR3	Q04472	501 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	SRL1	Q08673	210 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	USB1	Q12208	290 aa	Known RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	YCT1	Q12235	531 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	RPS23A	P0CX29	145 aa	Known RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	RPS23B	P0CX30	145 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	GRX2	P17695	143 aa	Known RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	LDS1	P31379	325 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	RNP1	P32385	249 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	YOR292C	Q08743	309 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	YPL257W	Q08974	193 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	YPL162C	Q12042	273 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	RPL13A	Q12690	199 aa	Predicted RBP	0.83	□□□□□ -2.28
ROM2	YLR371W	YCL048W-A	Q2V2Q2	79 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	COA2	Q3E823	68 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	YAL067W-A	Q8TGK6	75 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	HTL1	Q9URQ5	78 aa		0.83	□□□□□ -2.28
ROM2	YLR371W	ALK2	P32789	676 aa	Predicted RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	MSA2	P36157	363 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	BNS1	P50084	137 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	RPL9B	P51401	191 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	MSA1	Q08471	629 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	YOR186W	Q08560	144 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	FSF1	Q12029	327 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	POC4	Q12245	148 aa	Predicted RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	PRM4	Q12498	284 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	HUG1	Q6Q5K6	68 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	SEC4	P07560	215 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	YCR023C	P25351	611 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	SRY1	P36007	326 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	MID2	P36027	376 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	ECM33	P38248	429 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	XPT1	P47165	209 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	UBC13	P52490	153 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	LOA1	Q06508	300 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	ADH1	P00330	348 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	TPI1	P00942	248 aa	Known RBP	0.82	□□□□□ -2.28
ROM2	YLR371W	ACB1	P31787	87 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	UTR5	P32630	166 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	SDH4	P37298	181 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	GPI18	P38211	433 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	PIR5	P46999	287 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	GEP7	P53171	287 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	SAE3	P89114	91 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	YDR119W-A	Q2V2P9	66 aa		0.82	□□□□□ -2.28
ROM2	YLR371W	UBC4	P15731	148 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	MRPL44	P19956	98 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	ROX3	P25046	220 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	YKR032W	P36127	104 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	VMA7	P39111	118 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	ARP3	P47117	449 aa	Known RBP	0.81	□□□□□ -2.28
ROM2	YLR371W	CWC27	Q02770	301 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	SCP1	Q08873	200 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	RAD6	P06104	172 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	AIM19	P40502	157 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	YGR050C	P53231	118 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	RSM27	P53305	110 aa		0.81	□□□□□ -2.28
ROM2	YLR371W	RSM19	P53733	91 aa	Predicted RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms