RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W NSA2P40078 261 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W GEP7P53171 287 aa1.45□□□□□ -2.18
CFT2YLR115W SAY1P53324 424 aa1.45□□□□□ -2.18
CFT2YLR115W ACC1Q00955 2233 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W ECM29P38737 1868 aa1.45□□□□□ -2.18
CFT2YLR115W TIM9O74700 87 aa1.45□□□□□ -2.18
CFT2YLR115W YBL081WP38180 368 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W BAT2P47176 376 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W DIE2P50076 525 aa1.45□□□□□ -2.18
CFT2YLR115W BNS1P50084 137 aa1.45□□□□□ -2.18
CFT2YLR115W YDR274CP87283 123 aa1.45□□□□□ -2.18
CFT2YLR115W YMR090WQ04304 227 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W GAL83Q04739 417 aa1.45□□□□□ -2.18
CFT2YLR115W SWC7Q06707 132 aa1.45□□□□□ -2.18
CFT2YLR115W YPR063CQ12160 140 aa1.45□□□□□ -2.18
CFT2YLR115W DUR1,2P32528 1835 aaKnown RBP1.44□□□□□ -2.18
CFT2YLR115W RPL43AP0CX25 92 aaKnown RBP1.44□□□□□ -2.18
CFT2YLR115W RPL43BP0CX26 92 aa1.44□□□□□ -2.18
CFT2YLR115W MRPL11P36521 249 aaPredicted RBP1.44□□□□□ -2.18
CFT2YLR115W UMP1P38293 148 aa1.44□□□□□ -2.18
CFT2YLR115W SPC25P40014 221 aa1.44□□□□□ -2.18
CFT2YLR115W YIR035CP40579 254 aa1.44□□□□□ -2.18
CFT2YLR115W YNR062CP53748 327 aa1.44□□□□□ -2.18
CFT2YLR115W YNR064CP53750 290 aa1.44□□□□□ -2.18
CFT2YLR115W LIP1Q03579 150 aa1.44□□□□□ -2.18
CFT2YLR115W YHP1Q04116 353 aa1.44□□□□□ -2.18
CFT2YLR115W YCR075W-AQ3E830 75 aa1.44□□□□□ -2.18
CFT2YLR115W RPL9AP05738 191 aaKnown RBP1.44□□□□□ -2.18
CFT2YLR115W ADK1P07170 222 aaKnown RBP1.44□□□□□ -2.18
CFT2YLR115W SGA1P08019 549 aa1.44□□□□□ -2.18
CFT2YLR115W TVP23P38962 199 aa1.44□□□□□ -2.18
CFT2YLR115W YEL028WP39989 153 aa1.44□□□□□ -2.18
CFT2YLR115W YER188WP40103 239 aa1.44□□□□□ -2.18
CFT2YLR115W GTT1P40582 234 aa1.44□□□□□ -2.18
CFT2YLR115W RPL9BP51401 191 aaKnown RBP1.44□□□□□ -2.18
CFT2YLR115W YGR026WP53217 278 aa1.44□□□□□ -2.18
CFT2YLR115W DAD3P69850 94 aa1.44□□□□□ -2.18
CFT2YLR115W SMD1Q02260 146 aaPredicted RBP1.44□□□□□ -2.18
CFT2YLR115W YLR042CQ07990 161 aa1.44□□□□□ -2.18
CFT2YLR115W ODC2Q99297 307 aa1.44□□□□□ -2.18
CFT2YLR115W COX5BP00425 151 aa1.43□□□□□ -2.18
CFT2YLR115W ATP15P21306 62 aa1.43□□□□□ -2.18
CFT2YLR115W COX10P21592 462 aa1.43□□□□□ -2.18
CFT2YLR115W TMA19P35691 167 aaKnown RBP1.43□□□□□ -2.18
CFT2YLR115W YET1P35723 206 aa1.43□□□□□ -2.18
CFT2YLR115W ECM31P38122 312 aa1.43□□□□□ -2.18
CFT2YLR115W YHR125WP38831 101 aa1.43□□□□□ -2.18
CFT2YLR115W SNU13P39990 126 aaKnown RBP1.43□□□□□ -2.18
CFT2YLR115W RRT13P40042 185 aa1.43□□□□□ -2.18
CFT2YLR115W VTC1P40046 129 aaRIP-Chip data1.43□□□□□ -2.18not detected
CFT2YLR115W YFR045WP43617 309 aa1.43□□□□□ -2.18
CFT2YLR115W SHH3Q04487 196 aa1.43□□□□□ -2.18
CFT2YLR115W RAF1Q06891 181 aa1.43□□□□□ -2.18
CFT2YLR115W DFM1Q12743 341 aaKnown RBP1.43□□□□□ -2.18
CFT2YLR115W YDR524C-BQ3E6R4 66 aa1.43□□□□□ -2.18
CFT2YLR115W MSB2P32334 1306 aa1.43□□□□□ -2.18
CFT2YLR115W MDH2P22133 377 aa1.43□□□□□ -2.18
CFT2YLR115W CLB6P32943 380 aa1.43□□□□□ -2.18
CFT2YLR115W ERV15P38312 142 aa1.43□□□□□ -2.18
CFT2YLR115W IPT1P38954 527 aa1.43□□□□□ -2.18
CFT2YLR115W GAA1P39012 614 aa1.43□□□□□ -2.18
CFT2YLR115W MIG3P39943 394 aa1.43□□□□□ -2.18
CFT2YLR115W YMR103CQ04436 120 aa1.43□□□□□ -2.18
CFT2YLR115W YPL247CQ12523 523 aa1.43□□□□□ -2.18
CFT2YLR115W IRA1P18963 3092 aa1.42□□□□□ -2.18
CFT2YLR115W TOM40P23644 387 aaKnown RBP1.42□□□□□ -2.18
CFT2YLR115W MPM1P40364 252 aa1.42□□□□□ -2.18
CFT2YLR115W FLX1P40464 311 aa1.42□□□□□ -2.18
CFT2YLR115W ECO1P43605 281 aa1.42□□□□□ -2.18
CFT2YLR115W RIM9Q04734 239 aa1.42□□□□□ -2.18
CFT2YLR115W ANT1Q06497 328 aa1.42□□□□□ -2.18
CFT2YLR115W FYV12Q08559 129 aa1.42□□□□□ -2.18
CFT2YLR115W FEX1Q08913 375 aa1.42□□□□□ -2.18
CFT2YLR115W FEX2Q08991 375 aa1.42□□□□□ -2.18
CFT2YLR115W MSW1P04803 379 aa1.42□□□□□ -2.18
CFT2YLR115W MID2P36027 376 aa1.42□□□□□ -2.18
CFT2YLR115W YKR032WP36127 104 aa1.42□□□□□ -2.18
CFT2YLR115W YAR029WP39549 74 aa1.42□□□□□ -2.18
CFT2YLR115W RPL13BP40212 199 aaKnown RBP1.42□□□□□ -2.18
CFT2YLR115W TIR3P40552 269 aa1.42□□□□□ -2.18
CFT2YLR115W PAM16P42949 149 aa1.42□□□□□ -2.18
CFT2YLR115W YCL001W-AP87012 153 aa1.42□□□□□ -2.18
CFT2YLR115W RSM10Q03201 203 aa1.42□□□□□ -2.18
CFT2YLR115W POR1P04840 283 aaKnown RBP1.41□□□□□ -2.18
CFT2YLR115W RAD10P06838 210 aa1.41□□□□□ -2.18
CFT2YLR115W YRA2P36036 203 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
CFT2YLR115W FYV4P38783 130 aaPredicted RBP1.41□□□□□ -2.18
CFT2YLR115W YHR130CP38834 111 aa1.41□□□□□ -2.18
CFT2YLR115W DOC1P53068 250 aa1.41□□□□□ -2.18
CFT2YLR115W THG1P53215 237 aaKnown RBP1.41□□□□□ -2.18
CFT2YLR115W PIR1Q03178 341 aa1.41□□□□□ -2.18
CFT2YLR115W FCF1Q05498 189 aaPredicted RBP1.41□□□□□ -2.18
CFT2YLR115W YAL067W-AQ8TGK6 75 aa1.41□□□□□ -2.18
CFT2YLR115W UBR1P19812 1950 aa1.41□□□□□ -2.18
CFT2YLR115W SRB6P32570 121 aa1.41□□□□□ -2.18
CFT2YLR115W PAM17P36147 197 aa1.41□□□□□ -2.18
CFT2YLR115W TRS20P38334 175 aa1.41□□□□□ -2.18
CFT2YLR115W CTR2P38865 189 aa1.41□□□□□ -2.18
CFT2YLR115W GPI19Q04082 140 aa1.41□□□□□ -2.18
CFT2YLR115W MIX14Q04341 121 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 181.2 ms