RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YPL073CP40323 161 aa2.6□□□□□ -1.99
RPN1YHR027C BRR6P53062 197 aa2.6□□□□□ -1.99
RPN1YHR027C YIL014C-AQ02598 104 aa2.6□□□□□ -1.99
RPN1YHR027C MRX11Q03079 207 aa2.6□□□□□ -1.99
RPN1YHR027C Q0255P03881 472 aa2.6□□□□□ -1.99
RPN1YHR027C RPB8P20436 146 aa2.6□□□□□ -1.99
RPN1YHR027C TOM40P23644 387 aaKnown RBP2.6□□□□□ -1.99
RPN1YHR027C NRG2P38082 220 aa2.6□□□□□ -1.99
RPN1YHR027C YER181CP40097 107 aa2.6□□□□□ -1.99
RPN1YHR027C JJJ3P47138 172 aa2.6□□□□□ -1.99
RPN1YHR027C YMR175W-AQ3E766 64 aa2.6□□□□□ -1.99
RPN1YHR027C Q0182Q9ZZW1 134 aa2.6□□□□□ -1.99
RPN1YHR027C CSH1P38287 376 aa2.59□□□□□ -1.99
RPN1YHR027C YHR140WP38842 239 aa2.59□□□□□ -1.99
RPN1YHR027C GGC1P38988 300 aa2.59□□□□□ -1.99
RPN1YHR027C SDS23P53172 527 aa2.59□□□□□ -1.99
RPN1YHR027C COF1Q03048 143 aaKnown RBP2.59□□□□□ -1.99
RPN1YHR027C YHM2Q04013 314 aa2.59□□□□□ -1.99
RPN1YHR027C YOR186WQ08560 144 aa2.59□□□□□ -1.99
RPN1YHR027C YPS3Q12303 508 aa2.59□□□□□ -1.99
RPN1YHR027C KSH1Q8TGJ3 72 aa2.59□□□□□ -1.99
RPN1YHR027C YCR006CP25350 157 aa2.59□□□□□ -2
RPN1YHR027C RFA2P26754 273 aaKnown RBP2.59□□□□□ -2
RPN1YHR027C YPS1P32329 569 aa2.59□□□□□ -2
RPN1YHR027C TIM12P32830 109 aa2.59□□□□□ -2
RPN1YHR027C SFT1P43682 97 aa2.59□□□□□ -2
RPN1YHR027C VPS55P47111 140 aa2.59□□□□□ -2
RPN1YHR027C YDR042CQ03205 200 aa2.59□□□□□ -2
RPN1YHR027C SDC1Q03323 175 aa2.59□□□□□ -2
RPN1YHR027C RAF1Q06891 181 aa2.59□□□□□ -2
RPN1YHR027C YBR255C-AQ3E776 120 aa2.59□□□□□ -2
RPN1YHR027C YPL038W-AQ3E7B4 63 aa2.59□□□□□ -2
RPN1YHR027C RPL23AP0CX41 137 aaKnown RBP2.58□□□□□ -2
RPN1YHR027C RPL23BP0CX42 137 aaKnown RBP2.58□□□□□ -2
RPN1YHR027C REC104P33323 182 aa2.58□□□□□ -2
RPN1YHR027C SMP1P38128 452 aa2.58□□□□□ -2
RPN1YHR027C LYS1P38998 373 aaRIP-Chip data2.58□□□□□ -2not detected
RPN1YHR027C SKI6P46948 246 aaPredicted RBP2.58□□□□□ -2
RPN1YHR027C PIS1P06197 220 aaKnown RBP2.58□□□□□ -2
RPN1YHR027C YHL042WP38729 150 aa2.58□□□□□ -2
RPN1YHR027C YHL018WP38744 120 aaPredicted RBP2.58□□□□□ -2
RPN1YHR027C YPI1P43587 155 aa2.58□□□□□ -2
RPN1YHR027C YMR317WQ04893 1140 aa2.58□□□□□ -2
RPN1YHR027C RXT3Q07458 294 aa2.58□□□□□ -2
RPN1YHR027C TIM18Q08749 192 aa2.58□□□□□ -2
RPN1YHR027C IMP1P28627 190 aa2.58□□□□□ -2
RPN1YHR027C DSS4P32601 143 aa2.58□□□□□ -2
RPN1YHR027C IES6P32617 166 aa2.58□□□□□ -2
RPN1YHR027C FZF1P32805 299 aa2.58□□□□□ -2
RPN1YHR027C SFT2P38166 215 aa2.58□□□□□ -2
RPN1YHR027C GPI18P38211 433 aa2.58□□□□□ -2
RPN1YHR027C YEL067CP39978 195 aa2.58□□□□□ -2
RPN1YHR027C MIM1Q08176 113 aa2.58□□□□□ -2
RPN1YHR027C YNL277W-AQ3E7Z0 62 aa2.58□□□□□ -2
RPN1YHR027C YLR365WQ7LIF2 110 aa2.58□□□□□ -2
RPN1YHR027C YHR139C-AO13536 103 aa2.57□□□□□ -2
RPN1YHR027C PAD1P33751 242 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
RPN1YHR027C MMS2P53152 137 aa2.57□□□□□ -2
RPN1YHR027C GPI19Q04082 140 aa2.57□□□□□ -2
RPN1YHR027C LSM6Q06406 86 aaKnown RBP2.57□□□□□ -2
RPN1YHR027C DAD1Q12248 94 aa2.57□□□□□ -2
RPN1YHR027C SUT2Q12286 268 aa2.57□□□□□ -2
RPN1YHR027C TRP1P00912 224 aa2.57□□□□□ -2
RPN1YHR027C APS1P35181 156 aa2.57□□□□□ -2
RPN1YHR027C SGN1P40561 250 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
RPN1YHR027C YNR077CP53758 84 aa2.57□□□□□ -2
RPN1YHR027C ATP19P81451 68 aa2.57□□□□□ -2
RPN1YHR027C IRC25Q07951 179 aa2.57□□□□□ -2
RPN1YHR027C YPR108W-AQ3E7B3 70 aa2.57□□□□□ -2
RPN1YHR027C HUG1Q6Q5K6 68 aa2.57□□□□□ -2
RPN1YHR027C PET191Q02772 108 aa2.56□□□□□ -2
RPN1YHR027C YMR321CQ04898 105 aa2.56□□□□□ -2
RPN1YHR027C SHH4Q06236 168 aa2.56□□□□□ -2
RPN1YHR027C RLM1Q12224 676 aa2.56□□□□□ -2
RPN1YHR027C YPR064WQ12492 139 aa2.56□□□□□ -2
RPN1YHR027C RPS2P25443 254 aaKnown RBP2.56□□□□□ -2
RPN1YHR027C PCL5P38794 229 aa2.56□□□□□ -2
RPN1YHR027C LST8P41318 303 aa2.56□□□□□ -2
RPN1YHR027C FIP1P45976 327 aa2.56□□□□□ -2
RPN1YHR027C YHR180WP38868 163 aa2.55□□□□□ -2
RPN1YHR027C TDA7P53882 636 aaPredicted RBP2.55□□□□□ -2
RPN1YHR027C YLR281CQ05863 155 aa2.55□□□□□ -2
RPN1YHR027C YDR381C-AQ3E6R5 114 aa2.55□□□□□ -2
RPN1YHR027C CDC39P25655 2108 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C PBI2P0CT04 75 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C ROX3P25046 220 aa2.55□□□□□ -2
RPN1YHR027C PET8P38921 284 aa2.55□□□□□ -2
RPN1YHR027C YER079WP40052 210 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C HSK3P69852 69 aa2.55□□□□□ -2
RPN1YHR027C HTL1Q9URQ5 78 aa2.55□□□□□ -2
RPN1YHR027C RPL28P02406 149 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C RPS8AP0CX39 200 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C RPS8BP0CX40 200 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C MRS3P10566 314 aa2.55□□□□□ -2
RPN1YHR027C MBB1P39534 108 aa2.55□□□□□ -2
RPN1YHR027C YGR050CP53231 118 aa2.55□□□□□ -2
RPN1YHR027C MOT3P54785 490 aaKnown RBP2.55□□□□□ -2
RPN1YHR027C YLR112WQ12130 139 aa2.55□□□□□ -2
RPN1YHR027C YLR302CO13544 120 aa2.54□□□□□ -2
RPN1YHR027C YDL022C-AP0C5L6 82 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms