RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	COG5	P53951	403 aa		1.07	□□□□□ -2.24
DOT6	YER088C	SNO1	Q03144	224 aa		1.07	□□□□□ -2.24
DOT6	YER088C	MRPS8	Q03799	155 aa		1.07	□□□□□ -2.24
DOT6	YER088C	YPL162C	Q12042	273 aa		1.07	□□□□□ -2.24
DOT6	YER088C	HUT1	Q12520	339 aa		1.07	□□□□□ -2.24
DOT6	YER088C	YGL041W-A	P0C5N3	154 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YLR156W	P0CE96	114 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YLR159W	P0CE97	114 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YLR161W	P0CE98	114 aa		1.06	□□□□□ -2.24
DOT6	YER088C	URA5	P13298	226 aa	Known RBP	1.06	□□□□□ -2.24
DOT6	YER088C	CKS1	P20486	150 aa	Known RBP	1.06	□□□□□ -2.24
DOT6	YER088C	BET1	P22804	142 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YKR045C	P36138	183 aa		1.06	□□□□□ -2.24
DOT6	YER088C	GNA1	P43577	159 aa	Predicted RBP	1.06	□□□□□ -2.24
DOT6	YER088C	YGR050C	P53231	118 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YIP3	P53633	176 aa		1.06	□□□□□ -2.24
DOT6	YER088C	RRP17	Q04031	235 aa	Predicted RBP	1.06	□□□□□ -2.24
DOT6	YER088C	FIT1	Q04433	528 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YOL160W	Q08321	113 aa		1.06	□□□□□ -2.24
DOT6	YER088C	PST2	Q12335	198 aa	Known RBP	1.06	□□□□□ -2.24
DOT6	YER088C	BOL1	Q3E793	110 aa		1.06	□□□□□ -2.24
DOT6	YER088C	TAR1	Q8TGM6	124 aa		1.06	□□□□□ -2.24
DOT6	YER088C	MBF1	O14467	151 aa	Known RBP	1.06	□□□□□ -2.24
DOT6	YER088C	SNC2	P33328	115 aa		1.06	□□□□□ -2.24
DOT6	YER088C	UPS2	P35200	230 aa		1.06	□□□□□ -2.24
DOT6	YER088C	MRPL38	P35996	138 aa	Predicted RBP	1.06	□□□□□ -2.24
DOT6	YER088C	DIE2	P50076	525 aa		1.06	□□□□□ -2.24
DOT6	YER088C	YNL184C	P53876	108 aa		1.06	□□□□□ -2.24
DOT6	YER088C	SPC2	Q04969	178 aa		1.06	□□□□□ -2.24
DOT6	YER088C	VAM10	Q08474	114 aa		1.06	□□□□□ -2.24
DOT6	YER088C	TSC3	Q3E790	80 aa		1.06	□□□□□ -2.24
DOT6	YER088C	QCR2	P07257	368 aa		1.05	□□□□□ -2.24
DOT6	YER088C	YER137C	P40083	148 aa	Known RBP	1.05	□□□□□ -2.24
DOT6	YER088C	YNL200C	P40165	246 aa	Known RBP	1.05	□□□□□ -2.24
DOT6	YER088C	TMA22	P47089	198 aa	Predicted RBP	1.05	□□□□□ -2.24
DOT6	YER088C	TDA4	P47153	279 aa		1.05	□□□□□ -2.24
DOT6	YER088C	PLP1	Q04004	230 aa		1.05	□□□□□ -2.24
DOT6	YER088C	YLR031W	Q07978	186 aa		1.05	□□□□□ -2.24
DOT6	YER088C	RAD28	Q12021	506 aa		1.05	□□□□□ -2.24
DOT6	YER088C	YPR014C	Q6B0W2	109 aa		1.05	□□□□□ -2.24
DOT6	YER088C	YJL197C-A	P0C5P0	93 aa		1.05	□□□□□ -2.24
DOT6	YER088C	DDI2	P0CH63	225 aa		1.05	□□□□□ -2.24
DOT6	YER088C	DDI3	P0CH64	225 aa		1.05	□□□□□ -2.24
DOT6	YER088C	PET54	P10834	293 aa		1.05	□□□□□ -2.24
DOT6	YER088C	RPB3	P16370	318 aa	Known RBP	1.05	□□□□□ -2.24
DOT6	YER088C	CNB1	P25296	175 aa		1.05	□□□□□ -2.24
DOT6	YER088C	BUD23	P25627	275 aa	Predicted RBP	1.05	□□□□□ -2.24
DOT6	YER088C	UMP1	P38293	148 aa		1.05	□□□□□ -2.24
DOT6	YER088C	JAC1	P53193	184 aa		1.05	□□□□□ -2.24
DOT6	YER088C	PAU12	P53343	120 aa		1.05	□□□□□ -2.24
DOT6	YER088C	SGF11	Q03067	99 aa		1.05	□□□□□ -2.24
DOT6	YER088C	AIM34	Q03673	198 aa		1.05	□□□□□ -2.24
DOT6	YER088C	HNT1	Q04344	158 aa	Known RBP	1.05	□□□□□ -2.24
DOT6	YER088C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
DOT6	YER088C	YOS1	Q3E834	85 aa		1.05	□□□□□ -2.24
DOT6	YER088C	YFR032C-B	Q8TGU2	87 aa		1.05	□□□□□ -2.24
DOT6	YER088C	MRS4	P23500	304 aa		1.04	□□□□□ -2.24
DOT6	YER088C	PDX3	P38075	228 aa	Known RBP	1.04	□□□□□ -2.24
DOT6	YER088C	VMA22	P38784	181 aa		1.04	□□□□□ -2.24
DOT6	YER088C	YER135C	P40082	130 aa		1.04	□□□□□ -2.24
DOT6	YER088C	PGD1	P40356	397 aa		1.04	□□□□□ -2.24
DOT6	YER088C	UBC12	P52491	188 aa		1.04	□□□□□ -2.24
DOT6	YER088C	ARO8	P53090	500 aa	Known RBP	1.04	□□□□□ -2.24
DOT6	YER088C	YPR013C	Q12145	317 aa		1.04	□□□□□ -2.24
DOT6	YER088C	YLR050C	Q12155	161 aa	Known RBP	1.04	□□□□□ -2.24
DOT6	YER088C	YOR192C-C	Q3E736	78 aa		1.04	□□□□□ -2.24
DOT6	YER088C	RPB7	P34087	171 aa		1.03	□□□□□ -2.24
DOT6	YER088C	AME1	P38313	324 aa		1.03	□□□□□ -2.24
DOT6	YER088C	NVJ1	P38881	321 aa		1.03	□□□□□ -2.24
DOT6	YER088C	YER076C	P40049	302 aa		1.03	□□□□□ -2.24
DOT6	YER088C	SKI6	P46948	246 aa	Predicted RBP	1.03	□□□□□ -2.24
DOT6	YER088C	MAK3	Q03503	176 aa		1.03	□□□□□ -2.24
DOT6	YER088C	SHH4	Q06236	168 aa		1.03	□□□□□ -2.24
DOT6	YER088C	HRD1	Q08109	551 aa		1.03	□□□□□ -2.24
DOT6	YER088C	DGA1	Q08650	418 aa		1.03	□□□□□ -2.24
DOT6	YER088C	YLR365W	Q7LIF2	110 aa		1.03	□□□□□ -2.24
DOT6	YER088C	AHC2	P25649	128 aa		1.03	□□□□□ -2.25
DOT6	YER088C	PAU2	P32612	120 aa		1.03	□□□□□ -2.25
DOT6	YER088C	SFK1	P35735	353 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YHR022C	P38763	256 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YHR138C	P38841	114 aa	Predicted RBP	1.03	□□□□□ -2.25
DOT6	YER088C	SNF11	P38956	169 aa		1.03	□□□□□ -2.25
DOT6	YER088C	POR2	P40478	281 aa		1.03	□□□□□ -2.25
DOT6	YER088C	GVP36	P40531	326 aa	Known RBP	1.03	□□□□□ -2.25
DOT6	YER088C	YKE4	P40544	346 aa		1.03	□□□□□ -2.25
DOT6	YER088C	RPL33B	P41056	107 aa	Known RBP	1.03	□□□□□ -2.25
DOT6	YER088C	LST8	P41318	303 aa		1.03	□□□□□ -2.25
DOT6	YER088C	ARP3	P47117	449 aa	Known RBP	1.03	□□□□□ -2.25
DOT6	YER088C	YGR042W	P53227	271 aa		1.03	□□□□□ -2.25
DOT6	YER088C	LCL2	Q08045	131 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YOL118C	Q08259	102 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YPR108W-A	Q3E7B3	70 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YKL068W-A	Q3E826	78 aa		1.03	□□□□□ -2.25
DOT6	YER088C	YKR041W	P36134	250 aa		1.02	□□□□□ -2.25
DOT6	YER088C	PAU24	P38155	120 aa		1.02	□□□□□ -2.25
DOT6	YER088C	ERV15	P38312	142 aa		1.02	□□□□□ -2.25
DOT6	YER088C	YER134C	P40081	178 aa		1.02	□□□□□ -2.25
DOT6	YER088C	CYT2	Q00873	224 aa		1.02	□□□□□ -2.25
DOT6	YER088C	IRC23	Q08416	157 aa		1.02	□□□□□ -2.25
DOT6	YER088C	YNL146C-A	Q3E7Z1	64 aa		1.02	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms