RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W GPI11Q06636 219 aa1.98□□□□□ -2.09
YDR340WYDR340W KTI11Q3E840 82 aa1.98□□□□□ -2.09
YDR340WYDR340W UBR2Q07963 1872 aa1.98□□□□□ -2.09
YDR340WYDR340W CDC39P25655 2108 aaKnown RBP1.97□□□□□ -2.09
YDR340WYDR340W KIN28P06242 306 aa1.97□□□□□ -2.09
YDR340WYDR340W RPB11P38902 120 aa1.97□□□□□ -2.09
YDR340WYDR340W NAT5Q08689 176 aa1.97□□□□□ -2.09
YDR340WYDR340W ADK1P07170 222 aaKnown RBP1.96□□□□□ -2.1
YDR340WYDR340W PRE1P22141 198 aaKnown RBP1.96□□□□□ -2.1
YDR340WYDR340W DCV1P43595 202 aa1.96□□□□□ -2.1
YDR340WYDR340W BRP1P53194 125 aa1.96□□□□□ -2.1
YDR340WYDR340W FCF2Q12035 217 aaPredicted RBP1.96□□□□□ -2.1
YDR340WYDR340W COA3Q3E7B2 85 aa1.96□□□□□ -2.1
YDR340WYDR340W YOR376W-AQ3E805 51 aa1.96□□□□□ -2.1
YDR340WYDR340W SPP41P38904 1435 aa1.96□□□□□ -2.1
YDR340WYDR340W YOR097CQ12274 175 aaPredicted RBP1.95□□□□□ -2.1
YDR340WYDR340W ACC1Q00955 2233 aaKnown RBP1.95□□□□□ -2.1
YDR340WYDR340W PAU21P0CE86 164 aa1.94□□□□□ -2.1
YDR340WYDR340W PAU22P0CE87 164 aa1.94□□□□□ -2.1
YDR340WYDR340W FUN14P18411 198 aa1.94□□□□□ -2.1
YDR340WYDR340W FPR1P20081 114 aaKnown RBP1.94□□□□□ -2.1
YDR340WYDR340W GSP1P32835 219 aaKnown RBP1.94□□□□□ -2.1
YDR340WYDR340W YLR042CQ07990 161 aa1.94□□□□□ -2.1
YDR340WYDR340W YER039C-AP0CD97 72 aa1.93□□□□□ -2.1
YDR340WYDR340W NMT1P14743 455 aa1.93□□□□□ -2.1
YDR340WYDR340W ANB1P19211 157 aa1.93□□□□□ -2.1
YDR340WYDR340W HYP2P23301 157 aaKnown RBP1.93□□□□□ -2.1
YDR340WYDR340W SRL3P36167 246 aa1.93□□□□□ -2.1
YDR340WYDR340W HSP10P38910 106 aa1.93□□□□□ -2.1
YDR340WYDR340W YER137CP40083 148 aaKnown RBP1.93□□□□□ -2.1
YDR340WYDR340W YGL230CP53074 147 aa1.93□□□□□ -2.1
YDR340WYDR340W YPL067CQ02754 198 aa1.93□□□□□ -2.1
YDR340WYDR340W GTT2Q12390 233 aa1.93□□□□□ -2.1
YDR340WYDR340W SNT2P53127 1403 aa1.92□□□□□ -2.1
YDR340WYDR340W SEC59P20048 519 aa1.92□□□□□ -2.1
YDR340WYDR340W LHP1P33399 275 aaKnown RBP1.92□□□□□ -2.1
YDR340WYDR340W YKL044WP36092 106 aa1.92□□□□□ -2.1
YDR340WYDR340W YBR242WP38331 238 aa1.92□□□□□ -2.1
YDR340WYDR340W RGI1P40043 161 aaPredicted RBP1.92□□□□□ -2.1
YDR340WYDR340W YFL065CP43539 102 aa1.92□□□□□ -2.1
YDR340WYDR340W YFL051CP43552 160 aa1.92□□□□□ -2.1
YDR340WYDR340W YGL149WP53116 101 aa1.92□□□□□ -2.1
YDR340WYDR340W ERV14P53173 138 aa1.92□□□□□ -2.1
YDR340WYDR340W VAM10Q08474 114 aa1.92□□□□□ -2.1
YDR340WYDR340W YCR099CP25657 155 aa1.91□□□□□ -2.1
YDR340WYDR340W YBR027CP38220 110 aa1.91□□□□□ -2.1
YDR340WYDR340W YFR035CP43608 114 aa1.91□□□□□ -2.1
YDR340WYDR340W FIT1Q04433 528 aa1.91□□□□□ -2.1
YDR340WYDR340W YAR029WP39549 74 aa1.9□□□□□ -2.11
YDR340WYDR340W BAT2P47176 376 aaKnown RBP1.9□□□□□ -2.11
YDR340WYDR340W IGO1P53897 168 aa1.9□□□□□ -2.11
YDR340WYDR340W SED1Q01589 338 aa1.9□□□□□ -2.11
YDR340WYDR340W MHF1Q3E835 90 aa1.9□□□□□ -2.11
YDR340WYDR340W GSC2P40989 1895 aa1.9□□□□□ -2.11
YDR340WYDR340W HAP3P13434 144 aa1.89□□□□□ -2.11
YDR340WYDR340W SNF11P38956 169 aa1.89□□□□□ -2.11
YDR340WYDR340W PAM16P42949 149 aa1.89□□□□□ -2.11
YDR340WYDR340W RPS12P48589 143 aaKnown RBP1.89□□□□□ -2.11
YDR340WYDR340W RTR2Q12378 196 aa1.89□□□□□ -2.11
YDR340WYDR340W TY1B-HO13535 1793 aa1.89□□□□□ -2.11
YDR340WYDR340W TRM732Q03496 1420 aa1.89□□□□□ -2.11
YDR340WYDR340W RTC6O14464 93 aa1.88□□□□□ -2.11
YDR340WYDR340W MRPL11P36521 249 aaPredicted RBP1.88□□□□□ -2.11
YDR340WYDR340W MRPL15P36523 253 aa1.88□□□□□ -2.11
YDR340WYDR340W GPI19Q04082 140 aa1.88□□□□□ -2.11
YDR340WYDR340W TSC11P40061 1430 aa1.88□□□□□ -2.11
YDR340WYDR340W YGL014C-AP0C5N1 53 aa1.87□□□□□ -2.11
YDR340WYDR340W YHR213WP0CI67 198 aa1.87□□□□□ -2.11
YDR340WYDR340W YHR212W-AP0CX91 67 aa1.87□□□□□ -2.11
YDR340WYDR340W YLR296WQ05898 108 aa1.87□□□□□ -2.11
YDR340WYDR340W RPL33AP05744 107 aaKnown RBP1.86□□□□□ -2.11
YDR340WYDR340W RPL40AP0CH08 128 aaKnown RBP1.86□□□□□ -2.11
YDR340WYDR340W RPL40BP0CH09 128 aaKnown RBP1.86□□□□□ -2.11
YDR340WYDR340W ATG8P38182 117 aaRIP-Chip data1.86□□□□□ -2.11not detected
YDR340WYDR340W AQY2P0CD90 149 aa1.85□□□□□ -2.11
YDR340WYDR340W EMP24P32803 203 aaKnown RBP1.85□□□□□ -2.11
YDR340WYDR340W YHL037CP38733 133 aa1.85□□□□□ -2.11
YDR340WYDR340W AIM18P38884 321 aa1.85□□□□□ -2.11
YDR340WYDR340W TDA2P40045 126 aa1.85□□□□□ -2.11
YDR340WYDR340W LST8P41318 303 aa1.85□□□□□ -2.11
YDR340WYDR340W YGR164WP53291 111 aa1.85□□□□□ -2.11
YDR340WYDR340W YMR122CQ03879 124 aa1.85□□□□□ -2.11
YDR340WYDR340W YPR203WQ08994 102 aa1.85□□□□□ -2.11
YDR340WYDR340W FYV7Q12247 151 aa1.85□□□□□ -2.11
YDR340WYDR340W RPL36BO14455 100 aaKnown RBP1.84□□□□□ -2.11
YDR340WYDR340W RPL36AP05745 100 aaPredicted RBP1.84□□□□□ -2.11
YDR340WYDR340W OCA6Q12454 224 aa1.84□□□□□ -2.11
YDR340WYDR340W VAR1P02381 398 aa1.83□□□□□ -2.12
YDR340WYDR340W PFY1P07274 126 aa1.83□□□□□ -2.12
YDR340WYDR340W YJL197C-AP0C5P0 93 aa1.83□□□□□ -2.12
YDR340WYDR340W UTP11P34247 250 aaPredicted RBP1.83□□□□□ -2.12
YDR340WYDR340W SEN15Q04675 128 aa1.83□□□□□ -2.12
YDR340WYDR340W TOP2P06786 1428 aaKnown RBP1.83□□□□□ -2.12
YDR340WYDR340W YHR130CP38834 111 aa1.82□□□□□ -2.12
YDR340WYDR340W GNA1P43577 159 aaPredicted RBP1.82□□□□□ -2.12
YDR340WYDR340W YPL261CQ08976 102 aa1.82□□□□□ -2.12
YDR340WYDR340W YLR365WQ7LIF2 110 aa1.82□□□□□ -2.12
YDR340WYDR340W MED11Q99278 115 aa1.82□□□□□ -2.12
YDR340WYDR340W BEM2P39960 2167 aaKnown RBP1.81□□□□□ -2.12
YDR340WYDR340W YCR101CP25607 182 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms