RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YCR050CP25630 102 aa3.48□□□□□ -1.85
TRS85YDR108W ERG2P32352 222 aa3.48□□□□□ -1.85
TRS85YDR108W GLE2P40066 365 aa3.48□□□□□ -1.85
TRS85YDR108W SDC1Q03323 175 aa3.48□□□□□ -1.85
TRS85YDR108W YFH1Q07540 174 aa3.48□□□□□ -1.85
TRS85YDR108W LAA1P39526 2014 aa3.48□□□□□ -1.85
TRS85YDR108W TRP1P00912 224 aa3.48□□□□□ -1.85
TRS85YDR108W QRI5P32344 111 aa3.48□□□□□ -1.85
TRS85YDR108W YKL044WP36092 106 aa3.48□□□□□ -1.85
TRS85YDR108W ECM34P38728 170 aa3.48□□□□□ -1.85
TRS85YDR108W SDS23P53172 527 aa3.48□□□□□ -1.85
TRS85YDR108W SNT309Q06091 175 aaPredicted RBP3.48□□□□□ -1.85
TRS85YDR108W MSA1Q08471 629 aa3.48□□□□□ -1.85
TRS85YDR108W YMR316C-AI2HB70 103 aa3.47□□□□□ -1.85
TRS85YDR108W DIF1O13577 133 aa3.47□□□□□ -1.85
TRS85YDR108W RPL2AP0CX45 254 aaKnown RBP3.47□□□□□ -1.85
TRS85YDR108W RPL2BP0CX46 254 aaKnown RBP3.47□□□□□ -1.85
TRS85YDR108W YPS1P32329 569 aa3.47□□□□□ -1.85
TRS85YDR108W TOM6P33448 61 aa3.47□□□□□ -1.85
TRS85YDR108W YHL042WP38729 150 aa3.47□□□□□ -1.85
TRS85YDR108W SGN1P40561 250 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
TRS85YDR108W SFT1P43682 97 aa3.47□□□□□ -1.85
TRS85YDR108W HST4P53688 370 aa3.47□□□□□ -1.85
TRS85YDR108W YLR152CP54072 576 aa3.47□□□□□ -1.85
TRS85YDR108W LEE1Q02799 301 aaKnown RBP3.47□□□□□ -1.85
TRS85YDR108W YMR007WQ03675 126 aa3.47□□□□□ -1.85
TRS85YDR108W MCH4Q08268 501 aa3.47□□□□□ -1.85
TRS85YDR108W RFM1Q12192 310 aa3.47□□□□□ -1.85
TRS85YDR108W YPS3Q12303 508 aa3.47□□□□□ -1.85
TRS85YDR108W DFM1Q12743 341 aaKnown RBP3.47□□□□□ -1.85
TRS85YDR108W PAD1P33751 242 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
TRS85YDR108W NRG2P38082 220 aa3.47□□□□□ -1.85
TRS85YDR108W YHR140WP38842 239 aa3.47□□□□□ -1.85
TRS85YDR108W COX12Q01519 83 aa3.47□□□□□ -1.85
TRS85YDR108W IRC25Q07951 179 aa3.47□□□□□ -1.85
TRS85YDR108W BOL1Q3E793 110 aa3.47□□□□□ -1.85
TRS85YDR108W RPL23AP0CX41 137 aaKnown RBP3.46□□□□□ -1.86
TRS85YDR108W RPL23BP0CX42 137 aaKnown RBP3.46□□□□□ -1.86
TRS85YDR108W TOM40P23644 387 aaKnown RBP3.46□□□□□ -1.86
TRS85YDR108W YCR006CP25350 157 aa3.46□□□□□ -1.86
TRS85YDR108W OM14P38325 134 aa3.46□□□□□ -1.86
TRS85YDR108W YGR269WP40326 108 aa3.46□□□□□ -1.86
TRS85YDR108W MMS2P53152 137 aa3.46□□□□□ -1.86
TRS85YDR108W YGR219WP53307 113 aa3.46□□□□□ -1.86
TRS85YDR108W MIM1Q08176 113 aa3.46□□□□□ -1.86
TRS85YDR108W YNL277W-AQ3E7Z0 62 aa3.46□□□□□ -1.86
TRS85YDR108W HTL1Q9URQ5 78 aa3.46□□□□□ -1.86
TRS85YDR108W REC114P32841 428 aa3.45□□□□□ -1.86
TRS85YDR108W MRPS5P33759 307 aa3.45□□□□□ -1.86
TRS85YDR108W APS1P35181 156 aa3.45□□□□□ -1.86
TRS85YDR108W FMP46P36141 133 aaKnown RBP3.45□□□□□ -1.86
TRS85YDR108W YHL018WP38744 120 aaPredicted RBP3.45□□□□□ -1.86
TRS85YDR108W YPL073CP40323 161 aa3.45□□□□□ -1.86
TRS85YDR108W SKI6P46948 246 aaPredicted RBP3.45□□□□□ -1.86
TRS85YDR108W VPS55P47111 140 aa3.45□□□□□ -1.86
TRS85YDR108W HSK3P69852 69 aa3.45□□□□□ -1.86
TRS85YDR108W YDL211CQ12121 372 aa3.45□□□□□ -1.86
TRS85YDR108W USV1Q12132 391 aa3.45□□□□□ -1.86
TRS85YDR108W CSR2Q12734 1121 aa3.45□□□□□ -1.86
TRS85YDR108W KSH1Q8TGJ3 72 aa3.45□□□□□ -1.86
TRS85YDR108W YHR139C-AO13536 103 aa3.45□□□□□ -1.86
TRS85YDR108W PBI2P0CT04 75 aaKnown RBP3.45□□□□□ -1.86
TRS85YDR108W GPI18P38211 433 aa3.45□□□□□ -1.86
TRS85YDR108W MRX11Q03079 207 aa3.45□□□□□ -1.86
TRS85YDR108W RPC11Q04307 110 aaPredicted RBP3.45□□□□□ -1.86
TRS85YDR108W YPL038W-AQ3E7B4 63 aa3.45□□□□□ -1.86
TRS85YDR108W FZF1P32805 299 aa3.44□□□□□ -1.86
TRS85YDR108W SFT2P38166 215 aa3.44□□□□□ -1.86
TRS85YDR108W SVP26P38869 228 aa3.44□□□□□ -1.86
TRS85YDR108W LYS1P38998 373 aaRIP-Chip data3.44□□□□□ -1.86not detected
TRS85YDR108W YER079WP40052 210 aaKnown RBP3.44□□□□□ -1.86
TRS85YDR108W CIS3P47001 227 aa3.44□□□□□ -1.86
TRS85YDR108W RXT3Q07458 294 aa3.44□□□□□ -1.86
TRS85YDR108W YOR186WQ08560 144 aa3.44□□□□□ -1.86
TRS85YDR108W RPB8P20436 146 aa3.43□□□□□ -1.86
TRS85YDR108W SMP1P38128 452 aa3.43□□□□□ -1.86
TRS85YDR108W RPP1P38786 293 aa3.43□□□□□ -1.86
TRS85YDR108W FIP1P45976 327 aa3.43□□□□□ -1.86
TRS85YDR108W MST27P53176 234 aa3.43□□□□□ -1.86
TRS85YDR108W YGR164WP53291 111 aa3.43□□□□□ -1.86
TRS85YDR108W LSM6Q06406 86 aaKnown RBP3.43□□□□□ -1.86
TRS85YDR108W TIM18Q08749 192 aa3.43□□□□□ -1.86
TRS85YDR108W PIS1P06197 220 aaKnown RBP3.43□□□□□ -1.86
TRS85YDR108W IMP1P28627 190 aa3.43□□□□□ -1.86
TRS85YDR108W TIM12P32830 109 aa3.43□□□□□ -1.86
TRS85YDR108W SRX1P36077 127 aa3.43□□□□□ -1.86
TRS85YDR108W YAR029WP39549 74 aa3.43□□□□□ -1.86
TRS85YDR108W LST8P41318 303 aa3.43□□□□□ -1.86
TRS85YDR108W YPI1P43587 155 aa3.43□□□□□ -1.86
TRS85YDR108W SUT2Q12286 268 aa3.43□□□□□ -1.86
TRS85YDR108W CCH1P50077 2039 aa3.43□□□□□ -1.86
TRS85YDR108W FLO9P39712 1322 aa3.42□□□□□ -1.86
TRS85YDR108W MRS3P10566 314 aa3.42□□□□□ -1.86
TRS85YDR108W RPS2P25443 254 aaKnown RBP3.42□□□□□ -1.86
TRS85YDR108W RFA2P26754 273 aaKnown RBP3.42□□□□□ -1.86
TRS85YDR108W YRA2P36036 203 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
TRS85YDR108W DSE2P38844 325 aa3.42□□□□□ -1.86
TRS85YDR108W PEX22P39718 180 aa3.42□□□□□ -1.86
TRS85YDR108W RRT13P40042 185 aa3.42□□□□□ -1.86
TRS85YDR108W YMR317WQ04893 1140 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms