RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 HHATQ5VTY9 493 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 E4F1Q66K89 784 aaPredicted RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 NECAB2Q7Z6G3 386 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 ADAT2Q7Z6V5 191 aaKnown RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 SAPCD2Q86UD0 394 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 ATL2Q8NHH9 583 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 ATRIPQ8WXE1 791 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PURBQ96QR8 312 aaKnown RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.8□□□□□ -1.481e-7■■□□□ 12.5
CHD2-227ENST00000637572 CDT1Q9H211 546 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 DHX35Q9H5Z1 703 aaKnown RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 AVENQ9NQS1 362 aaPredicted RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.8□□□□□ -1.483e-6■■□□□ 11.6
CHD2-227ENST00000637572 HDAC6Q9UBN7 1215 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 POLIQ9UNA4 740 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PRG3Q9Y2Y8 225 aaPredicted RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 DNMT3AQ9Y6K1 912 aaPredicted RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 A0A0B4J269 797 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 SMIM23A6NLE4 172 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 LRRIQ3A6PVS8 624 aaPredicted RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 LACTBL1A8MY62 500 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 KPNA7A9QM74 516 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 I3L4J1 428 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 RECQL4O94761 1208 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 CSPG5O95196 566 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 SMPD1P17405 629 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 SYN1P17600 705 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 VPS41P49754 854 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 COPS2P61201 443 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 DYNLT1P63172 113 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 BASP1P80723 227 aaKnown RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 CENPCQ03188 943 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 DEUP1Q05D60 604 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 GRIK3Q13003 919 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PDK2Q15119 407 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 MGAT5BQ3V5L5 792 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 KIAA1755Q5JYT7 1200 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 ZNF697Q5TEC3 545 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 BSPRYQ5W0U4 402 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 MAMDC4Q6UXC1 1216 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 RAD9BQ6WBX8 426 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 TRIM42Q8IWZ5 723 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 CPA5Q8WXQ8 436 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 LENG9Q96B70 501 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 CYFIP2Q96F07 1278 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 RNPC3Q96LT9 517 aaKnown RBP5.8□□□□□ -1.48
CHD2-227ENST00000637572 TBCBQ99426 244 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 ADAM2Q99965 735 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PI4K2AQ9BTU6 479 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 RNPEPQ9H4A4 650 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PDGFCQ9NRA1 345 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 KLK14Q9P0G3 267 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 VPS18Q9P253 973 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 PCDHB11Q9Y5F2 797 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 MAD1L1Q9Y6D9 718 aa5.8□□□□□ -1.48
CHD2-227ENST00000637572 BDP1A6H8Y1 2624 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ZBTB39O15060 712 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 LRG1P02750 347 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CYP3A5P20815 502 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 TUFMP49411 452 aaKnown RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 TPI1P60174 286 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 YWHAGP61981 247 aaKnown RBP eCLIP5.79□□□□□ -1.48
CHD2-227ENST00000637572 ROR1Q01973 937 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 MEA1Q16626 185 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 UGCGQ16739 394 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ZACNQ401N2 412 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CTXN3Q4LDR2 81 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 PRAMEF19Q5SWL8 479 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ACBD5Q5T8D3 534 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 ASTLQ6HA08 431 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 OVOS1Q6IE37 1185 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 C1orf228Q6PIY5 440 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CDR2LQ86X02 465 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 VPS52Q8N1B4 723 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ATP6V0D2Q8N8Y2 350 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CCT6BQ92526 530 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ZNF512Q96ME7 567 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 PLCD4Q9BRC7 762 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 NFKBIZQ9BYH8 718 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 PPCSQ9HAB8 311 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 OLA1Q9NTK5 396 aaKnown RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 KLHL8Q9P2G9 620 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 PTPN22Q9Y2R2 807 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CHD8Q9HCK8 2581 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ANKRD63C9JTQ0 380 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 PMM2O15305 246 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 RTN3O95197 1032 aaPredicted RBP5.79□□□□□ -1.48
CHD2-227ENST00000637572 SELPP16109 830 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 MPSTP25325 297 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 CXCR5P32302 372 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 PLTPP55058 493 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 JAG1P78504 1218 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 ZBTB16Q05516 673 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 PTPROQ16827 1216 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 P3H1Q32P28 736 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 GLRA4Q5JXX5 417 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 SLC51AQ86UW1 340 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 FAM71BQ8TC56 605 aa5.79□□□□□ -1.48
CHD2-227ENST00000637572 SYT15Q9BQS2 421 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms