RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZWILCHQ9H900 591 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 PRDM10Q9NQV6 1147 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 CEP83Q9Y592 693 aa8.24□□□□□ -1.09
NEK3-207ENST00000617054 TARSL2A2RTX5 802 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 ARL5CA6NH57 179 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 PIRO00625 290 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 KRT3P12035 628 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 AXLP30530 894 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 ITIH3Q06033 890 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 PDCLQ13371 301 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 TRIP13Q15645 432 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 KYAT1Q16773 422 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 SEL1L2Q5TEA6 688 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 LHX8Q68G74 356 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 B4GALNT4Q76KP1 1039 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 RNF180Q86T96 592 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 RSPH3Q86UC2 560 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 ARFGAP1Q8N6T3 406 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 KBTBD7Q8WVZ9 684 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MAGOHBQ96A72 148 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 ADAM2Q99965 735 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MRPL47Q9HD33 250 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 SAE1Q9UBE0 346 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 UBQLN1Q9UMX0 589 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 PCDHGC3Q9UN70 934 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 R3HDM2Q9Y2K5 976 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 TRIM17Q9Y577 477 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 PTCH2Q9Y6C5 1203 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 TCRBV5S1A1TA0A578 114 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MIF4GDA9UHW6 222 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 H3BQF6 201 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 GABBR2O75899 941 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MYBL1P10243 752 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 RALAP11233 206 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 GNL1P36915 607 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 YWHAEP62258 255 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 MGAT3Q09327 533 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 LPIN1Q14693 890 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 TCEAL1Q15170 157 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 WSCD1Q658N2 575 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 OR6B2Q6IFH4 312 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 XYLT1Q86Y38 959 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 TSEN2Q8NCE0 465 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 CHST7Q9NS84 486 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 OGFRQ9NZT2 677 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 CES2O00748 559 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MED7O43513 233 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 KPNA6O60684 536 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 PAEPP09466 180 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 ATF7P17544 494 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 ATP11AP98196 1134 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MTFR1Q15390 333 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 CNGA2Q16280 664 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 C15orf59Q2T9L4 293 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 FAM102AQ5T9C2 384 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 HDXQ7Z353 690 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 CTU1Q7Z7A3 348 aaKnown RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 SLC13A5Q86YT5 568 aaPredicted RBP8.23□□□□□ -1.09
NEK3-207ENST00000617054 CD302Q8IX05 232 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 RAPGEF5Q92565 580 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 C10orf88Q9H8K7 445 aa8.23□□□□□ -1.09
NEK3-207ENST00000617054 MAP2K7O14733 419 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 BEST1O76090 585 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 CALB1P05937 261 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 VDRP11473 427 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 YY1P25490 414 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 PSMA2P25787 234 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 IL1R2P27930 398 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 VPS41P49754 854 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TUBB4BP68371 445 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 INCA1Q0VD86 236 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 PAK2Q13177 524 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 SMC1AQ14683 1233 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TRNP1Q6NT89 227 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 CCDC137Q6PK04 289 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 APBB1IPQ7Z5R6 666 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 APPL2Q8NEU8 664 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 SLC2A14Q8TDB8 520 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 VCPIP1Q96JH7 1222 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 GLT1D1Q96MS3 346 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 MAGEB5Q9BZ81 275 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 CYP3A43Q9HB55 503 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 GDF3Q9NR23 364 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 SNX24Q9Y343 169 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 A0A1W2PQ45 241 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 A0A1W2PQY0 241 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 CYB561D2O14569 222 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 LSM8O95777 96 aaKnown RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 CD48P09326 243 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 LCP1P13796 627 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
NEK3-207ENST00000617054 HOXD10P28358 340 aa8.22□□□□□ -1.09
NEK3-207ENST00000617054 TKTP29401 623 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms