RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 BMS1Q14692 1282 aaKnown RBP8.38□□□□□ -1.07
SDF2-210ENST00000592250 TMEM132DQ14C87 1099 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 NAB2Q15742 525 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 LIMS2Q7Z4I7 341 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PPM1KQ8N3J5 372 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 TPCN2Q8NHX9 752 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PHOSPHO2Q8TCD6 241 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 TOP1MTQ969P6 601 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PPP1R10Q96QC0 940 aaKnown RBP8.38□□□□□ -1.07
SDF2-210ENST00000592250 ADAM2Q99965 735 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
SDF2-210ENST00000592250 MIOSQ9NXC5 875 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 ITGA11Q9UKX5 1188 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PCDHB2Q9Y5E7 798 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 SPTBN5Q9NRC6 3674 aaKnown RBP8.38□□□□□ -1.07
SDF2-210ENST00000592250 TET1Q8NFU7 2136 aa8.38□□□□□ -1.07
SDF2-210ENST00000592250 PTPRSQ13332 1948 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 GOLGA6L9A6NEM1 432 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 MEIS3P2A8K0S8 358 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 CYP26A1O43174 497 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 PHACTR2O75167 634 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 OFD1O75665 1012 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 TUBB4AP04350 444 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 ITGB3P05106 788 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 CCDC172P0C7W6 258 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 CYP11B1P15538 503 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 ZSCAN20P17040 1043 aaPredicted RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 IGFBP4P22692 258 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 LRPAP1P30533 357 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 GUCY2FP51841 1108 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 ETF1P62495 437 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 KRT83P78385 493 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 FMO1Q01740 532 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 ARID5AQ03989 594 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 SOX4Q06945 474 aaPredicted RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 TWF2Q6IBS0 349 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 SLC24A5Q71RS6 500 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 NOP9Q86U38 636 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 PALB2Q86YC2 1186 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 MICALL1Q8N3F8 863 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 TIFAQ96CG3 184 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 SLC9A7Q96T83 725 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 PCDHB18PQ96TA0 734 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 AGPAT1Q99943 283 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 NIF3L1Q9GZT8 377 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 SDCBP2Q9H190 292 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 FAM124BQ9H5Z6 455 aaPredicted RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 ELAC1Q9H777 363 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 ACP6Q9NPH0 428 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.07
SDF2-210ENST00000592250 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
SDF2-210ENST00000592250 TFR2Q9UP52 801 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 GIT1Q9Y2X7 761 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 SLC4A7Q9Y6M7 1214 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 MICAL3Q7RTP6 2002 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 CDH23Q9H251 3354 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 COL4A6Q14031 1691 aa8.37□□□□□ -1.07
SDF2-210ENST00000592250 EYSQ5T1H1 3165 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 BTNL10A8MVZ5 291 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 PPEF2O14830 753 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 AKR1B10O60218 316 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 GJB5O95377 273 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 AMHP03971 560 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 ATP2A2P16615 1042 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 POLR2BP30876 1174 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 MAGEA1P43355 309 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 RAB27AP51159 221 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 AFF1P51825 1210 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 RBP5P82980 135 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 SRSF11Q05519 484 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 TRPC3Q13507 836 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 PTPN14Q15678 1187 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 ZNF699Q32M78 642 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 TDRD12Q587J7 1177 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 C10orf76Q5T2E6 689 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 C9orf57Q5W0N0 161 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 ZNF385CQ66K41 422 aaPredicted RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 ALKBH5Q6P6C2 394 aaKnown RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 TMCO2Q7Z6W1 182 aaPredicted RBP8.36□□□□□ -1.07
SDF2-210ENST00000592250 SLC47A2Q86VL8 602 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 ECHDC2Q86YB7 292 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 HERC6Q8IVU3 1022 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 LRRC52Q8N7C0 313 aa8.36□□□□□ -1.07
SDF2-210ENST00000592250 SLC20A1Q8WUM9 679 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms