RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 APOL6Q9BWW8 343 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 NXF3Q9H4D5 531 aaKnown RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 FAM124BQ9H5Z6 455 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 LRRC4CQ9HCJ2 640 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 CWC15Q9P013 229 aaKnown RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 TUBGCP4Q9UGJ1 667 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 TSPAN16Q9UKR8 245 aa14.81□□□□□ -0.04
VPS33B-208ENST00000574755 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
VPS33B-208ENST00000574755 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 TREHO43280 583 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 IVDP26440 423 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 ITGA8P53708 1063 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 LMNB2Q03252 620 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 HADHQ16836 314 aaKnown RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 C12orf29Q8N999 325 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 PKNOX2Q96KN3 472 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 TRAIPQ9BWF2 469 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 PIN4Q9Y237 131 aaKnown RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 hCG_1818297A0A087WSY0 165 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 PPEF2O14830 753 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 RIPK2O43353 540 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 LIASO43766 372 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 RECQL4O94761 1208 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 ITGBL1O95965 494 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 KRT7P08729 469 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 GABRB2P47870 512 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 GUCY1A3Q02108 690 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 SLC25A11Q02978 314 aaKnown RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 BYSLQ13895 437 aaKnown RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 FAM102AQ5T9C2 384 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 BEST2Q8NFU1 509 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 UHMK1Q8TAS1 419 aaKnown RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 TMEM40Q8WWA1 233 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 C18orf25Q96B23 403 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-208ENST00000574755 DNPEPQ9ULA0 475 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 NEU2Q9Y3R4 380 aa14.8□□□□□ -0.04
VPS33B-208ENST00000574755 PIK3R2O00459 728 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 AKAP5P24588 427 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 RGS2P41220 211 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 CDKN2BP42772 138 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 ADAM17P78536 824 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 ZNF200P98182 395 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-208ENST00000574755 CAV1Q03135 178 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 SNX17Q15036 470 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 UBAP2Q5T6F2 1119 aaKnown RBP14.79□□□□□ -0.04
VPS33B-208ENST00000574755 RHBDF2Q6PJF5 856 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 ARFGAP1Q8N6T3 406 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 NMRK2Q9NPI5 230 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 RNF19AQ9NV58 838 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 ANAPC5Q9UJX4 755 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 ZNF148Q9UQR1 794 aa14.79□□□□□ -0.04
VPS33B-208ENST00000574755 TLDC2A0PJX2 215 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 HAS3O00219 553 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 CAND2O75155 1236 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 RNF8O76064 485 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 AXLP30530 894 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 PTPN7P35236 360 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 MAGOHP61326 146 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 ZBTB6Q15916 424 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 DNAH12Q6ZR08 3092 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 BCAS4Q8TDM0 211 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 USP6NLQ92738 828 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 HAUS1Q96CS2 278 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 TSPYL1Q9H0U9 437 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 CNTN3Q9P232 1028 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 DCDC2CA8MYV0 355 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 CYP3A5P20815 502 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 IL1R2P27930 398 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 CHKAP35790 457 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 STILQ15468 1287 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 TRMT10CQ7L0Y3 403 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 PRUNE1Q86TP1 453 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 ACOT1Q86TX2 421 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 LRRC52Q8N7C0 313 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 BBOF1Q8ND07 529 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 APBA2Q99767 749 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 KATNAL1Q9BW62 490 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 CDC42EP4Q9H3Q1 356 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 RABEP2Q9H5N1 569 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 AAASQ9NRG9 546 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
VPS33B-208ENST00000574755 PDCD11Q14690 1871 aaKnown RBP14.78□□□□□ -0.04
VPS33B-208ENST00000574755 E5RJQ4 531 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 TNPO2O14787 897 aaKnown RBP14.77□□□□□ -0.04
VPS33B-208ENST00000574755 GOLGA7BQ2TAP0 167 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 PPP1R26Q5T8A7 1209 aaPredicted RBP14.77□□□□□ -0.04
VPS33B-208ENST00000574755 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 DRICH1Q6PGQ1 229 aaPredicted RBP14.77□□□□□ -0.04
VPS33B-208ENST00000574755 FOXR1Q6PIV2 292 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 ALKAL1Q6UXT8 129 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms