RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MFSD2AQ8NA29 543 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GLIS1Q8NBF1 620 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CHST13Q8NET6 341 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RASSF8Q8NHQ8 419 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 FIBINQ8TAL6 211 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF384Q8TF68 577 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TSPEARQ8WU66 669 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SCFD2Q8WU76 684 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 FATE1Q969F0 183 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RMDN1Q96DB5 314 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 APOPT1Q96IL0 206 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SNX27Q96L92 541 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RBM14Q96PK6 669 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TRAPPC9Q96Q05 1148 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RBM15Q96T37 977 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TCF25Q9BQ70 676 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RTKNQ9BST9 563 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 FTOQ9C0B1 505 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SMARCAD1Q9H4L7 1026 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 BRF2Q9HAW0 419 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SARS2Q9NP81 518 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ATP13A2Q9NQ11 1180 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GPRC5CQ9NQ84 441 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 POLE3Q9NRF9 147 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SNX15Q9NRS6 342 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 USP40Q9NVE5 1235 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 STK26Q9P289 416 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 MARCH4Q9P2E8 410 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 DNAJB9Q9UBS3 223 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CLIP2Q9UDT6 1046 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 IL19Q9UHD0 177 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CPA4Q9UI42 421 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GRID1Q9ULK0 1009 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ATXN7L1Q9ULK2 861 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 AURKCQ9UQB9 309 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 LIPT1Q9Y234 373 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 WDR37Q9Y2I8 494 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 MTO1Q9Y2Z2 717 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 DERAQ9Y315 318 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 HS3ST4Q9Y661 456 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 IL16Q14005 1332 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 UNC13AQ9UPW8 1703 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 LRRD1A4D1F6 860 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 C2orf71A6NGG8 1288 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 GPR89AB7ZAQ6 455 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF263O14978 683 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SLFN14P0C7P3 912 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 GPR89BP0CG08 455 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 UBL4AP11441 157 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 NPPBP16860 134 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 KRT15P19012 456 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TYMPP19971 482 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 GABRB3P28472 473 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 RDXP35241 583 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TXKP42681 527 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 KRT17Q04695 432 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SPEM2Q0P670 501 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CETN1Q12798 172 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SP140Q13342 867 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CAMK2DQ13557 499 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TYSND1Q2T9J0 566 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 ARHGAP15Q53QZ3 475 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 BOLA3Q53S33 107 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 GLRA4Q5JXX5 417 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM69AQ5T7M9 428 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 OTUD7BQ6GQQ9 843 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CAVIN1Q6NZI2 390 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 MEX3BQ6ZN04 569 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 HFE2Q6ZVN8 426 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 RAB11FIP2Q7L804 512 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 HEATR3Q7Z4Q2 680 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 ADGRA1Q86SQ6 560 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEM200AQ86VY9 491 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC103Q8IW40 242 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 ANKRD53Q8N9V6 530 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 POGLUT1Q8NBL1 392 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 RCBTB1Q8NDN9 531 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 NFKBIDQ8NI38 313 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SCAMP5Q8TAC9 235 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SETD6Q8TBK2 473 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CSGALNACT1Q8TDX6 532 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC22A17Q8WUG5 538 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 KBTBD7Q8WVZ9 684 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 VWCEQ96DN2 955 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 CYFIP2Q96F07 1278 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 LRRC46Q96FV0 321 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 PDLIM5Q96HC4 596 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 INSM2Q96T92 566 aaPredicted RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM118BQ9BPY3 351 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC39A3Q9BRY0 314 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TSEN34Q9BSV6 310 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 TBCDQ9BTW9 1192 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 DSCC1Q9BVC3 393 aa5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 UTP14AQ9BVJ6 771 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-210ENST00000572787 IL1RAPL2Q9NP60 686 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms