RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 EIF3HO15372 352 aaKnown RBP eCLIP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 LIASO43766 372 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 LRCH4O75427 683 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 MYL3P08590 195 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 CYP2B6P20813 491 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 ADCY8P40145 1251 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 CDKN2BP42772 138 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 SLC25A11Q02978 314 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 TFDP3Q5H9I0 405 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 DRICH1Q6PGQ1 229 aaPredicted RBP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 ZNF365Q70YC5 407 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 HOOK3Q86VS8 718 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 ARFGAP2Q8N6H7 521 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 AAASQ9NRG9 546 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 CNTN3Q9P232 1028 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 ANAPC5Q9UJX4 755 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 NOVA2Q9UNW9 492 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 HES2Q9Y543 173 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 LRRD1A4D1F6 860 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 C3orf70A6NLC5 250 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TREHO43280 583 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 RIPK2O43353 540 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 KRT7P08729 469 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 RGS2P41220 211 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 ITGA8P53708 1063 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 ZNF200P98182 395 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 BEX3Q00994 111 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 SNX17Q15036 470 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 STILQ15468 1287 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TTC19Q6DKK2 380 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TRMT10CQ7L0Y3 403 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 DPH6Q7L8W6 267 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 CCDC25Q86WR0 208 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 EMC1Q8N766 993 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 LRRC52Q8N7C0 313 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 CCDC89Q8N998 374 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 C18orf25Q96B23 403 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 ACSF2Q96CM8 615 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TMEM109Q9BVC6 243 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TRAIPQ9BWF2 469 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TSPYL1Q9H0U9 437 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 CWC15Q9P013 229 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TUBGCP4Q9UGJ1 667 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 GJD2Q9UKL4 321 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 PDCD11Q14690 1871 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 CAND2O75155 1236 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 RECQL4O94761 1208 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 IGHA2P01877 340 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 PFKMP08237 780 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 KLRC2P26717 231 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 IL1R2P27930 398 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 HPDP32754 393 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 BYSLQ13895 437 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 ACAP1Q15027 740 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 UBAP2Q5T6F2 1119 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 BBOF1Q8ND07 529 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 MRPL45Q9BRJ2 306 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TRIM6Q9C030 488 aaPredicted RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 NXF3Q9H4D5 531 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 ZWILCHQ9H900 591 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 TSPAN16Q9UKR8 245 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 DRG1Q9Y295 367 aaKnown RBP14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 EFR3BQ9Y2G0 817 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 SNX9Q9Y5X1 595 aa14.76□□□□□ -0.05
RAB3IP-216ENST00000552199 CHKAP35790 457 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 MDH1P40925 334 aaKnown RBP14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 C9orf57Q5W0N0 161 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 GSTA5Q7RTV2 222 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 CROCCP2Q86T23 111 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 IFNL1Q8IU54 200 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 C12orf29Q8N999 325 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 IPO4Q8TEX9 1081 aaKnown RBP14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 APBA2Q99767 749 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 KATNAL1Q9BW62 490 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 MIS12Q9H081 205 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 NMRK2Q9NPI5 230 aa14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 PIN4Q9Y237 131 aaKnown RBP14.75□□□□□ -0.05
RAB3IP-216ENST00000552199 C17orf102A2RUQ5 167 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 AKAP5P24588 427 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 VPS41P49754 854 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 MAGOHP61326 146 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 PPP2R2AP63151 447 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 GUCY1A3Q02108 690 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 TAZQ16635 292 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 SKIDA1Q1XH10 827 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 GOLGA7BQ2TAP0 167 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 GLRA4Q5JXX5 417 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 PPP1R26Q5T8A7 1209 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 FOXR1Q6PIV2 292 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 PGM2Q96G03 612 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 APOL6Q9BWW8 343 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 CDC42EP4Q9H3Q1 356 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 ASNSD1Q9NWL6 643 aa14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 UBQLN1Q9UMX0 589 aaKnown RBP14.74□□□□□ -0.05
RAB3IP-216ENST00000552199 ZNF148Q9UQR1 794 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms