RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 TRIM6Q9C030 488 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ZMYND12Q9H0C1 365 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CCDC86Q9H6F5 360 aaKnown RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 EBF1Q9UH73 591 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 EVLQ9UI08 416 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 RAXQ9Y2V3 346 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 INSL5Q9Y5Q6 135 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 SLC12A7Q9Y666 1083 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PI4KAP42356 2102 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ESYT2A0FGR8 921 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEM189-UBE2V1I3L0A0 370 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PRRG1O14668 218 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ATG13O75143 517 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 B3GAT3O94766 335 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 NPTXRO95502 500 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 MYL1P05976 194 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 THP07101 528 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 MYL4P12829 197 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 TKTP29401 623 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 GBP1P32455 592 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ELF1P32519 619 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 MCM5P33992 734 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PSMC5P62195 406 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 NCBP1Q09161 790 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PWP1Q13610 501 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 KARSQ15046 597 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF423Q2M1K9 1284 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ARHGAP29Q52LW3 1261 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PPP4R4Q6NUP7 873 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 SLC27A1Q6PCB7 646 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 KRBA2Q6ZNG9 492 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 CAPN12Q6ZSI9 719 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 KIAA0907Q7Z7F0 614 aaPredicted RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 C11orf96Q7Z7L8 435 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 SGMS1Q86VZ5 419 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ARID3BQ8IVW6 561 aaPredicted RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 WDR75Q8IWA0 830 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 HACE1Q8IYU2 909 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 REXO1Q8N1G1 1221 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 LEMD2Q8NC56 503 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 SHKBP1Q8TBC3 707 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 CEP170P1Q96L14 293 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF512Q96ME7 567 aaPredicted RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 LRRC3Q9BY71 257 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 LRRC2Q9BYS8 371 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 DNAJC25Q9H1X3 360 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP4F11Q9HBI6 524 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 FBRSL1Q9HCM7 1045 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 WRAP73Q9P2S5 460 aaPredicted RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PCDHGA11Q9Y5H2 935 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 RAI2Q9Y5P3 530 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 COL12A1Q99715 3063 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PTPRQQ9UMZ3 2332 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 PLXNB3Q9ULL4 1909 aa5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 GOLGA4Q13439 2230 aaKnown RBP5.32□□□□□ -1.56
NPIPB4-219ENST00000543660 MGAQ8IWI9 3026 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 THADAQ6YHU6 1953 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 A0A1W2PRU2 124 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 CCDC189A1A4V9 331 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 OTOL1A6NHN0 477 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ESPNB1AK53 854 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 I3L4J1 428 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 EML1O00423 815 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TRDMT1O14717 391 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 APBB3O95704 486 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 EGFP01133 1207 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ENGP17813 658 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 BCKDHBP21953 392 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 CDC27P30260 824 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 RDXP35241 583 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 GNALP38405 381 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 BRCC3P46736 316 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 QARSP47897 775 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 USP11P51784 963 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 EPHB1P54762 984 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 GYS2P54840 703 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TWF1Q12792 350 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 GRSF1Q12849 480 aaKnown RBP eCLIP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 LMAN2Q12907 356 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 CAPSQ13938 189 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 MXD4Q14582 209 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 EMC2Q15006 297 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ITPRIPL2Q3MIP1 535 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 Q4G0T1 1027 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TRIM61Q5EBN2 209 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 STXBP5Q5T5C0 1151 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 APOA5Q6Q788 366 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 SYT13Q7L8C5 426 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP2U1Q7Z449 544 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF605Q86T29 641 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TMC8Q8IU68 726 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms