RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 NR1H3Q13133 447 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 CUL4BQ13620 913 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 ZNF268Q14587 947 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 CMTM8Q8IZV2 173 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 GPR161Q8N6U8 529 aaKnown RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 MYRFLQ96LU7 910 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 PI4K2AQ9BTU6 479 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 ELOVL4Q9GZR5 314 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 HEBP1Q9NRV9 189 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 SIX4Q9UIU6 781 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 PCDHGA2Q9Y5H1 932 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 FAM237AA0A1B0GTK4 181 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 CLIC2O15247 247 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
CDCA3-208ENST00000540683 MOSPD3O75425 235 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 NOL4O94818 638 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 VNN2O95498 520 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 USP17L7P0C7H9 530 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 KRT13P13646 458 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ATF6P18850 670 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 NLRP12P59046 1061 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 GRM2Q14416 872 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 KCNB1Q14721 858 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 PDGFRLQ15198 375 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 NFIL3Q16649 462 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 SOWAHAQ2M3V2 549 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ITPRIPL2Q3MIP1 535 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 FAM171BQ6P995 826 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
CDCA3-208ENST00000540683 GAREM2Q75VX8 874 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 MON1AQ86VX9 555 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 MYCBPAPQ8TBZ2 947 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 TRPM5Q9NZQ8 1165 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 DLGAP2Q9P1A6 1054 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 SERTAD1Q9UHV2 236 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
CDCA3-208ENST00000540683 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-208ENST00000540683 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 PRR23AA6NEV1 266 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 ATG13O75143 517 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 SMC2O95347 1197 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 SP9P0CG40 484 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 GRIK1P39086 918 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 PPP1R2P41236 205 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 VIPR2P41587 438 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 CLDN10P78369 228 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 DENND5BQ6ZUT9 1274 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 LIMS2Q7Z4I7 341 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDCA3-208ENST00000540683 SCN4BQ8IWT1 228 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 STKLD1Q8NE28 680 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 GIPC2Q8TF65 315 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 HPS3Q969F9 1004 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 FAXDC2Q96IV6 333 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 FGFBP2Q9BYJ0 223 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 PLA2G2FQ9BZM2 168 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 IKZF4Q9H2S9 585 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-208ENST00000540683 FAM86C1Q9NVL1 165 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 MAGED2Q9UNF1 606 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-208ENST00000540683 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
CDCA3-208ENST00000540683 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
CDCA3-208ENST00000540683 SLC38A8A6NNN8 435 aa11.08□□□□□ -0.64
CDCA3-208ENST00000540683 A8MXQ7 604 aa11.08□□□□□ -0.64
CDCA3-208ENST00000540683 SLC9A3R1O14745 358 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms