RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 NDC80O14777 642 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 MAFO75444 373 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 CREB1P16220 341 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 ADCY8P40145 1251 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 STAT5BP51692 787 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 CACNA2D1P54289 1103 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 WNT7BP56706 349 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 LRRC38Q5VT99 294 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 IER5Q5VY09 327 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 MRPL4Q9BYD3 311 aaKnown RBP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 TMEM165Q9HC07 324 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 PREBQ9HCU5 417 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 PTPRJQ12913 1337 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 GSTTP1A0A1W2PQM5 241 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 ENTPD5O75356 428 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 CALCAP01258 141 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 RALAP11233 206 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 SERPINB4P48594 390 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 ZNF132P52740 706 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 LBX2Q6XYB7 198 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 MYLK4Q86YV6 388 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 RIOX2Q8IUF8 465 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 AGGF1Q8N302 714 aaeCLIP18.87■□□□□ 0.61
RAB40C-203ENST00000535977 GDAP1Q8TB36 358 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 SEPT1Q8WYJ6 367 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 ATXN10Q9UBB4 475 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 ZNF232Q9UNY5 417 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 LRCH1Q9Y2L9 728 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 NUB1Q9Y5A7 615 aa18.87■□□□□ 0.61
RAB40C-203ENST00000535977 TMEM120BA0PK00 339 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 TP73O15350 636 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 TOM1L1O75674 476 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 FARP2O94887 1054 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 EDNRBP24530 442 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 ITGA8P53708 1063 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 ZNF606Q8WXB4 792 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 CCDC77Q9BR77 488 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 MYLK2Q9H1R3 596 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 SUDS3Q9H7L9 328 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 AAASQ9NRG9 546 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 NEU2Q9Y3R4 380 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 SIGLEC16A6NMB1 481 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 UBA1P22314 1058 aaKnown RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 MMP8P22894 467 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 TARSP26639 723 aaKnown RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 SESN3P58005 492 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 CAPSQ13938 189 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 MXD4Q14582 209 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-203ENST00000535977 UBR7Q8N806 425 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 ANKRD42Q8N9B4 389 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 GALNT8Q9NY28 637 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 HAO1Q9UJM8 370 aa18.86■□□□□ 0.61
RAB40C-203ENST00000535977 CNTN2Q02246 1040 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 MCL1Q07820 350 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 CCDC15Q0P6D6 951 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 ACBD5Q5T8D3 534 aaPredicted RBP18.85■□□□□ 0.61
RAB40C-203ENST00000535977 DRICH1Q6PGQ1 229 aaPredicted RBP18.85■□□□□ 0.61
RAB40C-203ENST00000535977 ANKRD23Q86SG2 305 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 OR5B17Q8NGF7 314 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.85■□□□□ 0.61
RAB40C-203ENST00000535977 CKAP2Q8WWK9 683 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 ATG4AQ8WYN0 398 aa18.85■□□□□ 0.61
RAB40C-203ENST00000535977 YWHAEP62258 255 aaKnown RBP18.84■□□□□ 0.61
RAB40C-203ENST00000535977 DUOXA2Q1HG44 320 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 PRAMEF18Q5VWM3 479 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 VSTM1Q6UX27 236 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 METTL7BQ6UX53 244 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 SESTD1Q86VW0 696 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 VSIG1Q86XK7 387 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 PASD1Q8IV76 773 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TMEM35BQ8NCS4 154 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 PTPRN2Q92932 1015 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 AZIN2Q96A70 460 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 GBP5Q96PP8 586 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 PCYT2Q99447 389 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 C2orf40Q9H1Z8 148 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 DENND2DQ9H6A0 471 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-203ENST00000535977 LCTP09848 1927 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 OGTO15294 1046 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TJP3O95049 919 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 EPHB2P29323 1055 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TAS2R40P59535 323 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 WASHC2DQ5SRD0 308 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 ZBTB8OSQ8IWT0 167 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TGS1Q96RS0 853 aaKnown RBP18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TBC1D10AQ9BXI6 508 aa18.84■□□□□ 0.61
RAB40C-203ENST00000535977 TMEM191CA6NGB0 347 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 GH1P01241 217 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.61
RAB40C-203ENST00000535977 ZBTB41Q5SVQ8 909 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 PHLDB2Q86SQ0 1253 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 FAM84AQ96KN4 292 aa18.83■□□□□ 0.61
RAB40C-203ENST00000535977 PTPN7P35236 360 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms