RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 PAQR9Q6ZVX9 377 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 SPATA2LQ8IUW3 424 aaPredicted RBP18.54■□□□□ 0.56
CLP1-204ENST00000529773 TTC9BQ8N6N2 239 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 SLC7A14Q8TBB6 771 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 CEP295NLQ96MC4 621 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 HNRNPABQ99729 332 aaKnown RBP18.54■□□□□ 0.56
CLP1-204ENST00000529773 B3GNT5Q9BYG0 378 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 UBE2ZQ9H832 354 aaPredicted RBP18.54■□□□□ 0.56
CLP1-204ENST00000529773 CYP4F11Q9HBI6 524 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 CLDND1Q9NY35 253 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 ABI2Q9NYB9 513 aaPredicted RBP18.54■□□□□ 0.56
CLP1-204ENST00000529773 YIPF1Q9Y548 306 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 PCDHB4Q9Y5E5 795 aa18.54■□□□□ 0.56
CLP1-204ENST00000529773 RNF225M0QZC1 329 aaPredicted RBP18.53■□□□□ 0.56
CLP1-204ENST00000529773 AP5Z1O43299 807 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 SPATA31D3P0C874 917 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 TUFMP49411 452 aaKnown RBP18.53■□□□□ 0.56
CLP1-204ENST00000529773 DUSP4Q13115 394 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 DRAP1Q14919 205 aaPredicted RBP18.53■□□□□ 0.56
CLP1-204ENST00000529773 MEA1Q16626 185 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 ZNF394Q53GI3 561 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 SPATA31D4Q6ZUB0 917 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 C12orf29Q8N999 325 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 ZNF707Q96C28 371 aaPredicted RBP18.53■□□□□ 0.56
CLP1-204ENST00000529773 IQCDQ96DY2 449 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 LPIN3Q9BQK8 851 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 EDEM3Q9BZQ6 932 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 ZNF518BQ9C0D4 1074 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 MYO6Q9UM54 1294 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 COG5Q9UP83 839 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 PATJQ8NI35 1801 aa18.53■□□□□ 0.56
CLP1-204ENST00000529773 ATP8B3O60423 1300 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 O00370 1275 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 VDRP11473 427 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 ATF6P18850 670 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 ELF1P32519 619 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 POLR2FP61218 127 aaKnown RBP18.52■□□□□ 0.56
CLP1-204ENST00000529773 PLD1Q13393 1074 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 CCDC85BQ15834 202 aaPredicted RBP18.52■□□□□ 0.56
CLP1-204ENST00000529773 ARHGAP44Q17R89 818 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 SMRP1Q8NCR6 262 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 SLC2A14Q8TDB8 520 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 BAP1Q92560 729 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 SMARCD1Q96GM5 515 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 S1PR5Q9H228 398 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 CSNK1G1Q9HCP0 422 aa18.52■□□□□ 0.56
CLP1-204ENST00000529773 A0A1W2PQJ5 194 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 FOXN3O00409 490 aaPredicted RBP18.51■□□□□ 0.55
CLP1-204ENST00000529773 PRRG1O14668 218 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 RFPL2O75678 378 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 CCDC130P13994 396 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 CYP2F1P24903 491 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 CYP27A1Q02318 531 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 ITIH3Q06033 890 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 STILQ15468 1287 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 PPM1LQ5SGD2 360 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 PPP1R26Q5T8A7 1209 aaPredicted RBP18.51■□□□□ 0.55
CLP1-204ENST00000529773 HLA-CQ95604 372 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 CYFIP2Q96F07 1278 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 C8orf48Q96LL4 319 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 PCMTD1Q96MG8 357 aaPredicted RBP18.51■□□□□ 0.55
CLP1-204ENST00000529773 HEXIM2Q96MH2 286 aaKnown RBP18.51■□□□□ 0.55
CLP1-204ENST00000529773 ZSWIM1Q9BR11 485 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 NUP58Q9BVL2 599 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 PRKD2Q9BZL6 878 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 TMEM30AQ9NV96 361 aa18.51■□□□□ 0.55
CLP1-204ENST00000529773 CLDN5O00501 218 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 KRT5P13647 590 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 BDNFP23560 247 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 CLCN1P35523 988 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 PTPN21Q16825 1174 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 MGAT5BQ3V5L5 792 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 GPR149Q86SP6 731 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 VSTM4Q8IW00 320 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 TFAP2BQ92481 460 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 SUSD6Q92537 303 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 SPATA17Q96L03 361 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 ADAM7Q9H2U9 754 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 PNPLA8Q9NP80 782 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 KRT82Q9NSB4 513 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLP1-204ENST00000529773 SLC27A5Q9Y2P5 690 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 ASB3Q9Y575 518 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 BRWD1Q9NSI6 2320 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 DENND4AQ7Z401 1863 aa18.5■□□□□ 0.55
CLP1-204ENST00000529773 XIRP2A4UGR9 3374 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 TRIM66O15016 1216 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 CYP26A1O43174 497 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 PNMA6AP0CW24 399 aaPredicted RBP18.49■□□□□ 0.55
CLP1-204ENST00000529773 SOX5P35711 763 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 CACNA2D1P54289 1103 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 RPL10AP62906 217 aaKnown RBP18.49■□□□□ 0.55
CLP1-204ENST00000529773 TWF1Q12792 350 aa18.49■□□□□ 0.55
CLP1-204ENST00000529773 CNGA2Q16280 664 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms