RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 ZSWIM3Q96MP5 696 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 RTKNQ9BST9 563 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 ST6GALNAC4Q9H4F1 302 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 ASB7Q9H672 318 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 LMAN1LQ9HAT1 526 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 PIAS3Q9Y6X2 628 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 NUP205Q92621 2012 aa9.07□□□□□ -0.96
DEPDC1-205ENST00000525124 A0A0B4J269 797 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ANO9A1A5B4 782 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 MYBPHLA2RUH7 354 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 LACTBL1A8MY62 500 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 PIRO00625 290 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 FOXD2O60548 495 aaPredicted RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ODC1P11926 461 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 HARSP12081 509 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 MYL4P12829 197 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 HOXA6P31267 233 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 TNFSF9P41273 254 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 SCTRP47872 440 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ALDH1A3P47895 512 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 LIG4P49917 911 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 LILRA4P59901 499 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 GTF2BQ00403 316 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 DUSP4Q13115 394 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ARHGAP29Q52LW3 1261 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 SEZ6Q53EL9 994 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 DGKKQ5KSL6 1271 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 DSTYKQ6XUX3 929 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 USP37Q86T82 979 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ITIH5Q86UX2 942 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 RALGPS2Q86X27 583 aaPredicted RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 SYNPOQ8N3V7 929 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 CSGALNACT1Q8TDX6 532 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 C2orf15Q8WU43 125 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 CDK5RAP3Q96JB5 506 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 FIZ1Q96SL8 496 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 CCSER1Q9C0I3 900 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 CRISPLD1Q9H336 500 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 RPF1Q9H9Y2 349 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 DSEQ9UL01 958 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 TBX20Q9UMR3 447 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 NDRG2Q9UN36 371 aaKnown RBP9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 C2CD2Q9Y426 696 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 ATG2BQ96BY7 2078 aa9.06□□□□□ -0.96
DEPDC1-205ENST00000525124 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 VWA3AA6NCI4 1184 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 HNRNPDLO14979 420 aaKnown RBP9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 TRAK2O60296 914 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 BMP15O95972 392 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 RETP07949 1114 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 MX2P20592 715 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 CCNE1P24864 410 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 VIPR2P41587 438 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 MATR3P43243 847 aaKnown RBP eCLIP9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 CXCL12P48061 93 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 TUFMP49411 452 aaKnown RBP9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 ATXN1P54253 815 aaKnown RBP9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 RAD51AP2Q09MP3 1159 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 CLN3Q13286 438 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 RABEP1Q15276 862 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 C9orf57Q5W0N0 161 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 ARMCX5Q6P1M9 558 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 TSSK4Q6SA08 328 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 GAREM2Q75VX8 874 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 DNAJB7Q7Z6W7 309 aaPredicted RBP9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 NT5DC4Q86YG4 428 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 YAF2Q8IY57 180 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 HVCN1Q96D96 273 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 BICD1Q96G01 975 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 CALML4Q96GE6 196 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 SENP8Q96LD8 212 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 REEP2Q9BRK0 252 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 PARVGQ9HBI0 331 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 BLOC1S4Q9NUP1 217 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 RAB23Q9ULC3 237 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 STYXL1Q9Y6J8 313 aa9.05□□□□□ -0.96
DEPDC1-205ENST00000525124 CEP192Q8TEP8 1941 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 CCDC163A0A0D9SF12 145 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 SPECC1L-ADORA2AF8WAN1 911 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 K7ESF4 209 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 THBS1P07996 1170 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 OR4Q2P0C623 313 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 GJA1P17302 382 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 CDC25CP30307 473 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 LONP1P36776 959 aaKnown RBP9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 SPAG1Q07617 926 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 CCINQ13939 588 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 TMEM132DQ14C87 1099 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 PTPAQ15257 358 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 C8orf34Q49A92 452 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 ARHGAP15Q53QZ3 475 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 WDR44Q5JSH3 913 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 MCTP1Q6DN14 999 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 JADE1Q6IE81 842 aa9.04□□□□□ -0.96
DEPDC1-205ENST00000525124 SLFN12LQ6IEE8 588 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms