RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CAPN5O15484 640 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 PRPF3O43395 683 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 HOXD12P35452 270 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 EPHB3P54753 998 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CYP4A11Q02928 519 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CFHR1Q03591 330 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 SLC14A1Q13336 389 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 EPHA7Q15375 998 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 NPY5RQ15761 445 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 C2orf27AQ580R0 203 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CENPPQ6IPU0 288 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 SYNE3Q6ZMZ3 975 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 OTUD6AQ7L8S5 288 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 NAXDQ8IW45 347 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CMTM8Q8IZV2 173 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CCDC33Q8N5R6 958 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CEP120Q8N960 986 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 BSNDQ8WZ55 320 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 ACDQ96AP0 544 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 C18orf25Q96B23 403 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 CCDC113Q9H0I3 377 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 POLR3FQ9H1D9 316 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 THG1LQ9NWX6 298 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 VPS54Q9P1Q0 977 aa9.71□□□□□ -0.86
TRAPPC9-212ENST00000521944 PLXND1Q9Y4D7 1925 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 N4BP3O15049 544 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 OAZ2O95190 189 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 ATXN1LP0C7T5 689 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 CPB1P15086 417 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 ATXN3P54252 364 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 MESP2Q0VG99 397 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 PSMD2Q13200 908 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 NTRK3Q16288 839 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 GAB4Q2WGN9 574 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 SPDYCQ5MJ68 293 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 NT5DC1Q5TFE4 455 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 CREB3L3Q68CJ9 461 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZNF280DQ6N043 979 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 CCDC116Q8IYX3 515 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 RUFY2Q8WXA3 655 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 CD101Q93033 1021 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 HSD17B14Q9BPX1 270 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 LPIN3Q9BQK8 851 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 SEMA4CQ9C0C4 833 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 ZSWIM4Q9H7M6 989 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 ECT2Q9H8V3 914 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 PRMT7Q9NVM4 692 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 DDX25Q9UHL0 483 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 PCOLCE2Q9UKZ9 415 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 MMP17Q9ULZ9 603 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 TIMM13Q9Y5L4 95 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 CEP192Q8TEP8 1941 aa9.7□□□□□ -0.86
TRAPPC9-212ENST00000521944 KLF18A0A0U1RQI7 1052 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 LRRIQ4A6NIV6 560 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 ACKR2O00590 384 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 TLX3O43711 291 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 DKC1O60832 514 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 EIF2S3P41091 472 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 OPRD1P41143 372 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 RARRES1P49788 294 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 CDR1P51861 262 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 SEC13P55735 322 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 RELNP78509 3460 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 GPR17Q13304 367 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 PRPF4BQ13523 1007 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 TTC22Q5TAA0 569 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 DENND4CQ5VZ89 1909 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 MOXD1Q6UVY6 613 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 MAEAQ7L5Y9 396 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 SLC41A1Q8IVJ1 513 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 TPH2Q8IWU9 490 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 BOD1L1Q8NFC6 3051 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 CEP76Q8TAP6 659 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 BAHD1Q8TBE0 780 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 CCDC12Q8WUD4 166 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 APOBEC2Q9Y235 224 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 PCDHB9Q9Y5E1 797 aa9.69□□□□□ -0.86
TRAPPC9-212ENST00000521944 USP9YO00507 2555 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 MTMR11A4FU01 709 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 SGK1O00141 431 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 ADAM23O75077 832 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 LYPLA2O95372 231 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 LARGE1O95461 756 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 ATF6P18850 670 aa9.68□□□□□ -0.86
TRAPPC9-212ENST00000521944 NMT1P30419 496 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms