RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 KLHL11Q9NVR0 708 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 SNTG2Q9NY99 539 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 DRG1Q9Y295 367 aaKnown RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 TRIP11Q15643 1979 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 TRPM7Q96QT4 1865 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.39e-12■■■■□ 20.3
SNX5-214ENST00000490175 MDH1P40925 334 aaKnown RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 PSEN2P49810 448 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 TMEM62Q0P6H9 643 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 TAF1CQ15572 869 aaPredicted RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 CEP128Q6ZU80 1094 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 RASAL3Q86YV0 1011 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 JOSD2Q8TAC2 188 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 RAPGEF5Q92565 580 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 TLCD1Q96CP7 247 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 OSMRQ99650 979 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 FRMD8P1Q9BZ68 369 aaPredicted RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 FOXP3Q9BZS1 431 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 METTL5Q9NRN9 209 aaKnown RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 FLRT1Q9NZU1 646 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 CNTN3Q9P232 1028 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNX5-214ENST00000490175 TJP2Q9UDY2 1190 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 ANAPC5Q9UJX4 755 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 NOVA2Q9UNW9 492 aaKnown RBP16.94■□□□□ 0.3
SNX5-214ENST00000490175 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
SNX5-214ENST00000490175 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 LRCH4O75427 683 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 SHBGP04278 402 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 KRT10P13645 584 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 KLRC2P26717 231 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 ITGA8P53708 1063 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 PPP2R2AP63151 447 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 C6orf118Q5T5N4 469 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 ALKAL1Q6UXT8 129 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 KATNAL1Q9BW62 490 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 ROPN1BQ9BZX4 212 aaPredicted RBP16.93■□□□□ 0.3
SNX5-214ENST00000490175 AP5M1Q9H0R1 490 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 ROPN1Q9HAT0 212 aaPredicted RBP16.93■□□□□ 0.3
SNX5-214ENST00000490175 CDHR5Q9HBB8 845 aa16.93■□□□□ 0.3
SNX5-214ENST00000490175 PDCD11Q14690 1871 aaKnown RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 NDC80O14777 642 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 HPDP32754 393 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 RGS2P41220 211 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 KAZNQ674X7 775 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 TXNRD3NBQ6F5E7 133 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 GSTA5Q7RTV2 222 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 ZMAT2Q96NC0 199 aaKnown RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 EIF2AQ9BY44 585 aaKnown RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 TRIM6Q9C030 488 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 STMN4Q9H169 189 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 EBAG9O00559 213 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 RNF8O76064 485 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 SETSIPP0DME0 302 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 LSP1P33241 339 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 ZNF157P51786 506 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 CDR1P51861 262 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 TRIP13Q15645 432 aaPredicted RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 TAZQ16635 292 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 CCDC25Q86WR0 208 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 ARFGAP1Q8N6T3 406 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 SOCS4Q8WXH5 440 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 CNOT10Q9H9A5 744 aaKnown RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 ASNSD1Q9NWL6 643 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 SLC12A6Q9UHW9 1150 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 TSPAN16Q9UKR8 245 aa16.92■□□□□ 0.3
SNX5-214ENST00000490175 UBQLN1Q9UMX0 589 aaKnown RBP16.92■□□□□ 0.3
SNX5-214ENST00000490175 CAND2O75155 1236 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 CD4P01730 458 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 ITGAVP06756 1048 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 PCK1P35558 622 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 VCPP55072 806 aaKnown RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 MAGOHP61326 146 aaKnown RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 SNX17Q15036 470 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 RELL1Q8IUW5 271 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 NME8Q8N427 588 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 TTC13Q8NBP0 860 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 BCAS4Q8TDM0 211 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 DNAJB3Q8WWF6 145 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 APBA2Q99767 749 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 CDC42EP4Q9H3Q1 356 aaKnown RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 IGHA2P01877 340 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 GNAT1P11488 350 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 CYP3A5P20815 502 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 ZNF143P52747 638 aaPredicted RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 SNX16P57768 344 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 GUCY1A3Q02108 690 aa16.91■□□□□ 0.3
SNX5-214ENST00000490175 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
SNX5-214ENST00000490175 FAM102AQ5T9C2 384 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms