RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 KCTD16Q68DU8 428 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 NME8Q8N427 588 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 OR2W6PQ8NHA6 318 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 IPO4Q8TEX9 1081 aaKnown RBP21.47■■□□□ 1.03
HPS3-206ENST00000486530 MCRS1Q96EZ8 462 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 CAPNS2Q96L46 248 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 METTL5Q9NRN9 209 aaKnown RBP21.47■■□□□ 1.03
HPS3-206ENST00000486530 KLHL11Q9NVR0 708 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 TUBGCP4Q9UGJ1 667 aa21.47■■□□□ 1.03
HPS3-206ENST00000486530 DUSP11O75319 330 aaKnown RBP21.46■■□□□ 1.03
HPS3-206ENST00000486530 NUDT17P0C025 328 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 CYBAP13498 195 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 ATF7P17544 494 aaPredicted RBP21.46■■□□□ 1.03
HPS3-206ENST00000486530 HOXC8P31273 242 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 ACTN2P35609 894 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 CRYBB1P53674 252 aaPredicted RBP21.46■■□□□ 1.03
HPS3-206ENST00000486530 MFSD14CQ5VZR4 134 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 MFSD7Q6UXD7 560 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 SPOCD1Q6ZMY3 1216 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 ANKS1BQ7Z6G8 1248 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 SH2D3CQ8N5H7 860 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 JOSD2Q8TAC2 188 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 TMEM40Q8WWA1 233 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 SNF8Q96H20 258 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 TSPAN18Q96SJ8 248 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 CXCL16Q9H2A7 254 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 UBQLN1Q9UMX0 589 aaKnown RBP21.46■■□□□ 1.03
HPS3-206ENST00000486530 HES2Q9Y543 173 aa21.46■■□□□ 1.03
HPS3-206ENST00000486530 A6NNZ2 444 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 PI4K2BG5E9Z4 385 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 ITIH2P19823 946 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 PURAQ00577 322 aaKnown RBP21.45■■□□□ 1.02
HPS3-206ENST00000486530 HADHQ16836 314 aaKnown RBP21.45■■□□□ 1.02
HPS3-206ENST00000486530 TUBB8Q3ZCM7 444 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 TFDP3Q5H9I0 405 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 KDM7AQ6ZMT4 941 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 TSPAN16Q9UKR8 245 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 SNX9Q9Y5X1 595 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 KRT7P08729 469 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 ZNF200P98182 395 aaPredicted RBP21.45■■□□□ 1.02
HPS3-206ENST00000486530 SLC25A11Q02978 314 aaKnown RBP21.45■■□□□ 1.02
HPS3-206ENST00000486530 CAV1Q03135 178 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 LMNB2Q03252 620 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 PRKCZQ05513 592 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 ACAP1Q15027 740 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 EMC10Q5UCC4 262 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 DRICH1Q6PGQ1 229 aaPredicted RBP21.45■■□□□ 1.02
HPS3-206ENST00000486530 C7orf31Q8N865 590 aa21.45■■□□□ 1.02
HPS3-206ENST00000486530 hCG_1818297A0A087WSY0 165 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 MYADML2A6NDP7 307 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 PPEF2O14830 753 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 XPOTO43592 962 aaKnown RBP21.44■■□□□ 1.02
HPS3-206ENST00000486530 LRCH4O75427 683 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 CD4P01730 458 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 ATF2P15336 505 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 NR1D1P20393 614 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 IFFO1Q0D2I5 559 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 AGBL2Q5U5Z8 902 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 C9orf57Q5W0N0 161 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 DENND2CQ68D51 928 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 TXNRD3NBQ6F5E7 133 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 DPH6Q7L8W6 267 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 REM2Q8IYK8 340 aaPredicted RBP21.44■■□□□ 1.02
HPS3-206ENST00000486530 C18orf25Q96B23 403 aaPredicted RBP21.44■■□□□ 1.02
HPS3-206ENST00000486530 CAPS2Q9BXY5 557 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 EPB41L4BQ9H329 900 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 NEU2Q9Y3R4 380 aa21.44■■□□□ 1.02
HPS3-206ENST00000486530 LRRD1A4D1F6 860 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 KPNA6O60684 536 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 RARGP13631 454 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 CYP3A5P20815 502 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 CDKN2BP42772 138 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 GJA9P57773 515 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 GLRA4Q5JXX5 417 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 KAZNQ674X7 775 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 CCDC89Q8N998 374 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 BBOF1Q8ND07 529 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 UBA3Q8TBC4 463 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 MRPL45Q9BRJ2 306 aaKnown RBP21.43■■□□□ 1.02
HPS3-206ENST00000486530 APOL6Q9BWW8 343 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 TSPYL1Q9H0U9 437 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 LIASO43766 372 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 KRT10P13645 584 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 IVDP26440 423 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 TRIM32Q13049 653 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 GOLGA7BQ2TAP0 167 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 FAM102AQ5T9C2 384 aaPredicted RBP21.43■■□□□ 1.02
HPS3-206ENST00000486530 TAF2Q6P1X5 1199 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 RHBDF2Q6PJF5 856 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 HOOK3Q86VS8 718 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 UNC93AQ86WB7 457 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 RAPGEF5Q92565 580 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 ZNF560Q96MR9 790 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 EFR3BQ9Y2G0 817 aa21.43■■□□□ 1.02
HPS3-206ENST00000486530 SCN10AQ9Y5Y9 1956 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 SETSIPP0DME0 302 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 KCNE1P15382 129 aa21.42■■□□□ 1.02
HPS3-206ENST00000486530 AKAP5P24588 427 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms