RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 Q6YL49 198 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 TSHZ1Q6ZSZ6 1077 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 ZNF627Q7L945 461 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 C11orf96Q7Z7L8 435 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 LNX2Q8N448 690 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.06□□□□□ -1.76
TARDBP-208ENST00000477447 BEND2Q8NDZ0 799 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 SUPT20HQ8NEM7 779 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 CAVIN3Q969G5 261 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 FAM136AQ96C01 138 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 SNX22Q96L94 193 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 PPP1R9BQ96SB3 815 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 STRBPQ96SI9 672 aaKnown RBP4.06□□□□□ -1.76
TARDBP-208ENST00000477447 MESP1Q9BRJ9 268 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 PTDSS2Q9BVG9 487 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 BRIP1Q9BX63 1249 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 CXorf36Q9H7Y0 433 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 MID2Q9UJV3 735 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 SERTAD3Q9UJW9 196 aa4.06□□□□□ -1.76
TARDBP-208ENST00000477447 MRPS17Q9Y2R5 130 aaKnown RBP4.06□□□□□ -1.76
TARDBP-208ENST00000477447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.06□□□□□ -1.76
TARDBP-208ENST00000477447 GRID2IPA4D2P6 1211 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 RASA4BC9J798 803 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 H7C4K7 107 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 YY2O15391 372 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 RASA4O43374 803 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 PEX1O43933 1283 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 FSHBP01225 129 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 MT-ND5P03915 603 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 RHOP08100 348 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 CHRM2P08172 466 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 PDHA1P08559 390 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 HKR1P10072 659 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 SRGNP10124 158 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 TXNP10599 105 aaKnown RBP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 TSHRP16473 764 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 ACVR2AP27037 513 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 PPIFP30405 207 aaKnown RBP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 LRPAP1P30533 357 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 GDF5P43026 501 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 HNRNPMP52272 730 aaKnown RBP eCLIP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 ITGA8P53708 1063 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 PRKAG1P54619 331 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 AK2P54819 239 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 ITIH3Q06033 890 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 KLF10Q13118 480 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 HDAC1Q13547 482 aaPredicted RBP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 UBE4AQ14139 1066 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 E2F2Q14209 437 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 HECTD2Q5U5R9 776 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 SFRP4Q6FHJ7 346 aaPredicted RBP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 VWA1Q6PCB0 445 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 Q6ZNX1 250 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 SLC15A3Q8IY34 581 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 FAM109AQ8N4B1 249 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 BPIFB1Q8TDL5 484 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 IQCDQ96DY2 449 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 FBXL20Q96IG2 436 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 TNIP3Q96KP6 325 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 AMBRA1Q9C0C7 1298 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 ZNF212Q9UDV6 495 aa4.05□□□□□ -1.76
TARDBP-208ENST00000477447 NDRG4Q9ULP0 352 aaKnown RBP4.05□□□□□ -1.76
TARDBP-208ENST00000477447 LOC102723971A0A1B0GUV8 181 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 RAB27BO00194 218 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 PPM1DO15297 605 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 PROM1O43490 865 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 NCK2O43639 380 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 SRGAP2O75044 1071 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 RASAL1O95294 804 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 ANXA2P07355 339 aaKnown RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 TGM1P22735 817 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 TNFSF4P23510 183 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 TM4SF4P48230 202 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 ALDH5A1P51649 535 aaPredicted RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 HTRA4P83105 476 aaPredicted RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 FSTL1Q12841 308 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 MPP3Q13368 585 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 BRD3Q15059 726 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 ICE2Q659A1 982 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 SRLQ86TD4 932 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 IPCEF1Q8WWN9 437 aaPredicted RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 LINC00476Q8WZB0 136 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 FKBP10Q96AY3 582 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 COQ10AQ96MF6 247 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 RIPOR3Q96MK2 946 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 NELL2Q99435 816 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 MYD88Q99836 296 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 ELAC2Q9BQ52 826 aaKnown RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 SCAND2PQ9GZW5 306 aaPredicted RBP4.04□□□□□ -1.76
TARDBP-208ENST00000477447 CHST8Q9H2A9 424 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 SERHLQ9NQF3 203 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 STARD7Q9NQZ5 370 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 TBC1D23Q9NUY8 699 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 SLC52A1Q9NWF4 448 aa4.04□□□□□ -1.76
TARDBP-208ENST00000477447 ING1Q9UK53 422 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms