RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TSC2P49815 1807 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 CDH8P55286 799 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 RBP5P82980 135 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 STK4Q13043 487 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 CCINQ13939 588 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ZNF528Q3MIS6 628 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 SV2CQ496J9 727 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 INTS6LQ5JSJ4 861 aaKnown RBP8.67□□□□□ -1.02
USP48-207ENST00000471752 RESP18Q5W5W9 173 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 FSTL4Q6MZW2 842 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 FAM171BQ6P995 826 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 TRAPPC11Q7Z392 1133 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 SCN4BQ8IWT1 228 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 YAF2Q8IY57 180 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ADGRF2Q8IZF7 708 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 LEMD2Q8NC56 503 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 DEPDC1BQ8WUY9 529 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ATRIPQ8WXE1 791 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 SNX21Q969T3 373 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 WBP2Q969T9 261 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 NELL2Q99435 816 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ACBD6Q9BR61 282 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 OXCT2Q9BYC2 517 aaPredicted RBP8.67□□□□□ -1.02
USP48-207ENST00000471752 RNF38Q9H0F5 515 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.67□□□□□ -1.023e-6■■■■□ 24.6
USP48-207ENST00000471752 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 DSEQ9UL01 958 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 EXOC7Q9UPT5 735 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 CNOT1A5YKK6 2376 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 ATG2BQ96BY7 2078 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 TICRRQ7Z2Z1 1910 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 A0A1B0GVL5 298 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ZNF233A6NK53 670 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 MAN2B1O00754 1011 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 DPYSL4O14531 572 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ACTN4O43707 911 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 KINO60870 393 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 PPP6R2O75170 966 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 VNN1O95497 513 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 EGFP01133 1207 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 DLATP10515 647 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 TXLNAP40222 546 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 RAP1GAPP47736 663 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 GALK1P51570 392 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 MYL6P60660 151 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 DLG4P78352 724 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 POU5F1Q01860 360 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 CYP24A1Q07973 514 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ORC1Q13415 861 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 CCDC6Q16204 474 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 SNRNP35Q16560 246 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 RSPO4Q2I0M5 234 aaPredicted RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 C1orf220Q5T0J3 134 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ITIH5Q86UX2 942 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 MON1AQ86VX9 555 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 CCDC65Q8IXS2 484 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 DCP1BQ8IZD4 617 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 LRRC52Q8N7C0 313 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ARL14EPQ8N8R7 260 aaPredicted RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 SPPL2BQ8TCT7 592 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 BPIFB1Q8TDL5 484 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 CSGALNACT1Q8TDX6 532 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 RUBCNQ92622 972 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 MYLPFQ96A32 169 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 PAGE5Q96GU1 130 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 SYT15Q9BQS2 421 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 B3GNT5Q9BYG0 378 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 GPR88Q9GZN0 384 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 SDCBP2Q9H190 292 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 XYLT2Q9H1B5 865 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 TNMDQ9H2S6 317 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 TRPC7Q9HCX4 862 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 GCNT4Q9P109 453 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 HSFX1Q9UBD0 423 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ITGA11Q9UKX5 1188 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 SMG5Q9UPR3 1016 aaKnown RBP8.66□□□□□ -1.02
USP48-207ENST00000471752 WNT6Q9Y6F9 365 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 ZZEF1O43149 2961 aa8.66□□□□□ -1.02
USP48-207ENST00000471752 FANCMQ8IYD8 2048 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 GDF9O60383 454 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 NOL4O94818 638 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 YEATS4O95619 227 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 LDHAP00338 332 aaKnown RBP8.65□□□□□ -1.02
USP48-207ENST00000471752 TMEM191BP0C7N4 346 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 WEE1P30291 646 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 CDC25CP30307 473 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 CXCL12P48061 93 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 SLC6A11P48066 632 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 ME1P48163 572 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 TSPY1Q01534 308 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 SPEM2Q0P670 501 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 RUNX3Q13761 415 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 TAF12Q16514 161 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 GAB4Q2WGN9 574 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 ITPRIPL2Q3MIP1 535 aa8.65□□□□□ -1.02
USP48-207ENST00000471752 ARHGAP29Q52LW3 1261 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms