RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CILPO75339 1184 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 CSH1P0DML2 217 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 CSH2P0DML3 217 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 ATF6P18850 670 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 RAP1GAPP47736 663 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 STX1AQ16623 288 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 MDH1BQ5I0G3 518 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 SMYD5Q6GMV2 418 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 HS6ST3Q8IZP7 471 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 MYLPFQ96A32 169 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 C8orf48Q96LL4 319 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 ELOVL4Q9GZR5 314 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 DPEP3Q9H4B8 488 aa21.32■■□□□ 1
NPHP4-206ENST00000468253 ANHXE9PGG2 379 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 SOAT2O75908 522 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 BDNFP23560 247 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 TBXAS1P24557 533 aaPredicted RBP21.31■■□□□ 1
NPHP4-206ENST00000468253 CYP27A1Q02318 531 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 TAF12Q16514 161 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 DDR2Q16832 855 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 SLC5A9Q2M3M2 681 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 GET4Q7L5D6 327 aaPredicted RBP21.31■■□□□ 1
NPHP4-206ENST00000468253 ACOT1Q86TX2 421 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 TMC8Q8IU68 726 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 FAM200AQ8TCP9 573 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 WHAMMQ8TF30 809 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 MYRFLQ96LU7 910 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 B3GNT5Q9BYG0 378 aa21.31■■□□□ 1
NPHP4-206ENST00000468253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.31■■□□□ 18e-7■■■■■ 253
NPHP4-206ENST00000468253 GTPBP10A4D1E9 387 aaKnown RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 SOBPA7XYQ1 873 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 TRIM66O15016 1216 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 DCXO43602 365 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 MOSPD3O75425 235 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 HMGA1P17096 107 aaKnown RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 MTIF2P46199 727 aaKnown RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 YWHAEP62258 255 aaKnown RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 CUL2Q13617 745 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 SKOR2Q2VWA4 1001 aaPredicted RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 CAVIN1Q6NZI2 390 aaKnown RBP21.3■■□□□ 1
NPHP4-206ENST00000468253 CREBRFQ8IUR6 639 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 GIPC2Q8TF65 315 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 NT5C1BQ96P26 610 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 CISHQ9NSE2 258 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 EHD2Q9NZN4 543 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 ZMYM5Q9UJ78 669 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 MUC3AQ02505 3323 aa21.3■■□□□ 1
NPHP4-206ENST00000468253 ATP8B3O60423 1300 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 NOL4O94818 638 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 MYL4P12829 197 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 SP100P23497 879 aaPredicted RBP21.29■■□□□ 1
NPHP4-206ENST00000468253 EEF1GP26641 437 aaKnown RBP21.29■■□□□ 1
NPHP4-206ENST00000468253 GRIK1P39086 918 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 CCR2P41597 374 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 MAN2A1Q16706 1144 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 CCDC142Q17RM4 750 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 PAQR9Q6ZVX9 377 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 NPAS3Q8IXF0 933 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 JAKMIP2Q96AA8 810 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 TCEAL4Q96EI5 215 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 TRMT2BQ96GJ1 504 aaKnown RBP21.29■■□□□ 1
NPHP4-206ENST00000468253 HNRNPABQ99729 332 aaKnown RBP21.29■■□□□ 1
NPHP4-206ENST00000468253 LPIN3Q9BQK8 851 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 KCNK12Q9HB15 430 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 UXTQ9UBK9 157 aaPredicted RBP21.29■■□□□ 1
NPHP4-206ENST00000468253 NFE2L3Q9Y4A8 694 aa21.29■■□□□ 1
NPHP4-206ENST00000468253 TSC2P49815 1807 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 WEE1P30291 646 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 CDC25CP30307 473 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 CDR1P51861 262 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 GCNT1Q02742 428 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 TYRO3Q06418 890 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 PTPN21Q16825 1174 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 GAREM2Q75VX8 874 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 MTSS1LQ765P7 747 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 UBALD2Q8IYN6 164 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 FUKQ8N0W3 1084 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 SHKBP1Q8TBC3 707 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 TMEM176AQ96HP8 235 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 FAM81BQ96LP2 452 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 TUBGCP2Q9BSJ2 902 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 NAT10Q9H0A0 1025 aaKnown RBP21.28■■□□□ 1
NPHP4-206ENST00000468253 IL21Q9HBE4 155 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 SAMSN1Q9NSI8 373 aaKnown RBP21.28■■□□□ 1
NPHP4-206ENST00000468253 KIAA1257Q9ULG3 409 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 SORCS3Q9UPU3 1222 aa21.28■■□□□ 1
NPHP4-206ENST00000468253 SLC38A8A6NNN8 435 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 F11P03951 625 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 CD58P19256 250 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 ANXA13P27216 316 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 TCP11X2Q5H9J9 407 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 GBP6Q6ZN66 633 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 EDAQ92838 391 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 KHSRPQ92945 711 aaKnown RBP eCLIP21.27■■□□□ 1
NPHP4-206ENST00000468253 MCRS1Q96EZ8 462 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 CYFIP2Q96F07 1278 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 TWNKQ96RR1 684 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 ZNF518BQ9C0D4 1074 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 TRPV4Q9HBA0 871 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms