RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 CACHD1Q5VU97 1274 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 KCTD20Q7Z5Y7 419 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 ATG16L2Q8NAA4 619 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 CYP2W1Q8TAV3 490 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 PPM1EQ8WY54 764 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 TRIM63Q969Q1 353 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 LTV1Q96GA3 475 aaPredicted RBP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 OBP2BQ9NPH6 170 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 RGL1Q9NZL6 768 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 MRPS17Q9Y2R5 130 aaKnown RBP6.5□□□□□ -1.37
CCDC50-203ENST00000460064 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
CCDC50-203ENST00000460064 A0A087WZ62 844 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 PRAMEF33A0A0G2JMD5 474 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 PRAMEF10O60809 474 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 CFIP05156 583 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 HLA-DOAP06340 250 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 HOXA5P20719 270 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 GABRB3P28472 473 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 PDIA3P30101 505 aaKnown RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 GRK6P43250 576 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 NDUFV1P49821 464 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 DGKEP52429 567 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 RPS7P62081 194 aaKnown RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 PLP2Q04941 152 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 RAB30Q15771 203 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 B3GNTL1Q67FW5 361 aaPredicted RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 FCRL6Q6DN72 434 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 LRRC55Q6ZSA7 311 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 USP49Q70CQ1 688 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 ZNF354CQ86Y25 554 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 CPXCR1Q8N123 301 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 BPIFB1Q8TDL5 484 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 RNF31Q96EP0 1072 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 PTDSS2Q9BVG9 487 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 MYLK2Q9H1R3 596 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 ZNF768Q9H5H4 540 aaKnown RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 LUZP4Q9P127 313 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 LRFN1Q9P244 771 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 DKK4Q9UBT3 224 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 KCNE5Q9UJ90 142 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 CAPN11Q9UMQ6 739 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.49□□□□□ -1.37
CCDC50-203ENST00000460064 CDY1Q9Y6F8 540 aa6.49□□□□□ -1.37
CCDC50-203ENST00000460064 A0A0G2JLL6 359 aaPredicted RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 CCDC189A1A4V9 331 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 MYADML2A6NDP7 307 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 AQP7P3A6NL99 342 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 LGALS16A8MUM7 142 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 RNASET2O00584 256 aaKnown RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 PIP5K1BO14986 540 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 NPHP1O15259 732 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 TRIAP1O43715 76 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 FAM20BO75063 409 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 COQ9O75208 318 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 PIAS2O75928 621 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 NCR1O76036 304 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 NPTX2P47972 431 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 PRKAG1P54619 331 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 CXADRP78310 365 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 FAM189BP81408 668 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 MYO1EQ12965 1108 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 E2F2Q14209 437 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 SPARCL1Q14515 664 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 KCNAB1Q14722 419 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 HLXQ14774 488 aaPredicted RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 TLDC1Q6P9B6 456 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 CRTC1Q6UUV9 634 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 TMPRSS9Q7Z410 1059 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 FAM9AQ8IZU1 332 aaPredicted RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 IPO4Q8TEX9 1081 aaKnown RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 SNX19Q92543 992 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 TMEM125Q96AQ2 219 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 PAGR1Q9BTK6 254 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 PCDHAC1Q9H158 963 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 AGO4Q9HCK5 861 aaKnown RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 AKIP1Q9NQ31 210 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 NECTIN3Q9NQS3 549 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 ZMYND8Q9ULU4 1186 aaPredicted RBP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.48□□□□□ -1.37
CCDC50-203ENST00000460064 SPATA31A3Q5VYP0 1347 aa6.48□□□□□ -1.37
CCDC50-203ENST00000460064 A0A1W2PS29 197 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 NPC1O15118 1278 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 KCNQ3O43525 872 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 RRP9O43818 475 aaKnown RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ZFPL1O95159 310 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ACRV1P26436 265 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ATICP31939 592 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 GALNT1Q10472 559 aaPredicted RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 RESTQ13127 1097 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 NFIXQ14938 502 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 CYP2A13Q16696 494 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ZNF750Q32MQ0 723 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 PTCHD3Q3KNS1 767 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms