RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 NAB2Q15742 525 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 FAM187BQ17R55 369 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 GPR158Q5T848 1215 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 BROXQ5VW32 411 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 NOTUMQ6P988 496 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 TMEM92Q6UXU6 159 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ANKS3Q6ZW76 656 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 CDR2LQ86X02 465 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 CATSPER3Q86XQ3 398 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 DIS3L2Q8IYB7 885 aaKnown RBP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 RGL4Q8IZJ4 473 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 C4orf32Q8N8J7 132 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 LEMD2Q8NC56 503 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 BAHD1Q8TBE0 780 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 PIGOQ8TEQ8 1089 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 WASF1Q92558 559 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 HSPA12BQ96MM6 686 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 CDC6Q99741 560 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 CXCL16Q9H2A7 254 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ATXN3LQ9H3M9 355 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 SEPT3Q9UH03 358 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 BTBD3Q9Y2F9 522 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 FNDC3AQ9Y2H6 1198 aaKnown RBP6.16□□□□□ -1.42
HDAC8-212ENST00000421523 BACE2Q9Y5Z0 518 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ICE1Q9Y2F5 2266 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 INO80B-WBP1J3KQ70 363 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 PTGESO14684 152 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 NEMFO60524 1076 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CILPO75339 1184 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 B3GAT3O94766 335 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 ABLIM3O94929 683 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 BAG4O95429 457 aaKnown RBP6.15□□□□□ -1.42
HDAC8-212ENST00000421523 NPTXRO95502 500 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 AFPP02771 609 aaKnown RBP6.15□□□□□ -1.42
HDAC8-212ENST00000421523 EDN1P05305 212 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 RPA1P27694 616 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 GJA4P35212 333 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 HNF1BP35680 557 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TXKP42681 527 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CYP4F8P98187 520 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CRY1Q16526 586 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CALCRLQ16602 461 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 ECM1Q16610 540 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 SPDYCQ5MJ68 293 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 SLC8B1Q6J4K2 584 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CD300LGQ6UXG3 332 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 ERICH1Q86X53 443 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TRIML1Q8N9V2 468 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.15□□□□□ -1.42
HDAC8-212ENST00000421523 USP33Q8TEY7 942 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TSC1Q92574 1164 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CD101Q93033 1021 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 PRIMPOLQ96LW4 560 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TBC1D32Q96NH3 1257 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 LPIN3Q9BQK8 851 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 FAM83CQ9BQN1 747 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 SLC4A5Q9BY07 1137 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 CCDC113Q9H0I3 377 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 GAREM1Q9H706 876 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TUFT1Q9NNX1 390 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 ZDHHC4Q9NPG8 344 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 GPRC5CQ9NQ84 441 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 TM7SF3Q9NS93 570 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 MMP17Q9ULZ9 603 aa6.15□□□□□ -1.42
HDAC8-212ENST00000421523 PLXND1Q9Y4D7 1925 aa6.15□□□□□ -1.43
HDAC8-212ENST00000421523 CITO14578 2027 aa6.15□□□□□ -1.43
HDAC8-212ENST00000421523 A0A1W2PQD8 194 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TCRBV21S2A2A0A5A6 115 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 FLRT2O43155 660 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 CYP11B2P19099 503 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 MUTP22033 750 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 MAOBP27338 520 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 GABRR2P28476 465 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 ACTN2P35609 894 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 BRCC3P46736 316 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 NEK4P51957 841 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 UCNP55089 124 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TLE1Q04724 770 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TARDBPQ13148 414 aaKnown RBP eCLIP6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TFDP1Q14186 410 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 ARHGAP15Q53QZ3 475 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 SLC27A1Q6PCB7 646 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 USP49Q70CQ1 688 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 GAREM2Q75VX8 874 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TMPRSS12Q86WS5 348 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 SLC41A1Q8IVJ1 513 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 ALLCQ8N6M5 410 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 TXNDC5Q8NBS9 432 aaKnown RBP6.14□□□□□ -1.43
HDAC8-212ENST00000421523 EXOC4Q96A65 974 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 POLR3FQ9H1D9 316 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-212ENST00000421523 FOXP1Q9H334 677 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-212ENST00000421523 PDZD7Q9H5P4 517 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 LRRC4CQ9HCJ2 640 aa6.14□□□□□ -1.43
HDAC8-212ENST00000421523 OBP2AQ9NY56 170 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms