RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	NDUFAF2	Q8N183	169 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	FAM172A	Q8WUF8	416 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	RXFP2	Q8WXD0	754 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	DDX27	Q96GQ7	796 aa	Known RBP	13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	PAK5	Q9P286	719 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	PPME1	Q9Y570	386 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	CXCL11	O14625	94 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	POMC	P01189	267 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	RGS2	P41220	211 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	DNAJC3	Q13217	504 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	PTK7	Q13308	1070 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	NKX2-3	Q8TAU0	364 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	SGF29	Q96ES7	293 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	VCX3A	Q9NNX9	186 aa		13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.81	□□□□□ -0.2
BDNF-208	ENST00000418212	GOLGA8Q	A0A0J9YX86	632 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GTPBP10	A4D1E9	387 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GOLGA8O	A6NCC3	632 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GOLGA8N	F8WBI6	632 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	PPARG	P37231	505 aa	Predicted RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	MORF4L2	Q15014	288 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	ECM1	Q16610	540 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	EPS8L3	Q8TE67	593 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	XPO6	Q96QU8	1125 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	RANBP17	Q9H2T7	1088 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GPRC5D	Q9NZD1	345 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	HES2	Q9Y543	173 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GFAP	P14136	432 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	TWF1	Q12792	350 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	USP10	Q14694	798 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	C10orf120	Q5SQS8	335 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	C1orf146	Q5VVC0	180 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	SPATA21	Q7Z572	469 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	RNF180	Q86T96	592 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	FBXO41	Q8TF61	875 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	PABPC3	Q9H361	631 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	FAM47DP	A6NHR8	397 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	SMIM24	O75264	130 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	GHR	P10912	638 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	CHRM1	P11229	460 aa	Predicted RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	PRAMEF19	Q5SWL8	479 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	LRRC55	Q6ZSA7	311 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	ACAD11	Q709F0	780 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	PARP9	Q8IXQ6	854 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	ELMOD1	Q8N336	334 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	ZNF473	Q8WTR7	871 aa	Known RBP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	CEP41	Q9BYV8	373 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	RRAGC	Q9HB90	399 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	CYP39A1	Q9NYL5	469 aa		13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
BDNF-208	ENST00000418212	FAM237A	A0A1B0GTK4	181 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PPP1R11	O60927	126 aa	Predicted RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	GJB1	P08034	283 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	VDR	P11473	427 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	MMP14	P50281	582 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TMEM259	Q4ZIN3	620 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PTPRN2	Q92932	1015 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	CACYBP	Q9HB71	228 aa	Known RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SENP1	Q9P0U3	644 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ENDOD1	O94919	500 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ACADSB	P45954	432 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SLC26A2	P50443	739 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	BEX3	Q00994	111 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	GRIK4	Q16099	956 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	MEI1	Q5TIA1	1274 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ABRA	Q8N0Z2	381 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ZSWIM2	Q8NEG5	633 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SH3GL3	Q99963	347 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	EFHD1	Q9BUP0	239 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SEMA4A	Q9H3S1	761 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	WDCP	Q9H6R7	721 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ADA2	Q9NZK5	511 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	RNF225	M0QZC1	329 aa	Predicted RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PROSC	O94903	275 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PYGM	P11217	842 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	NDST1	P52848	882 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	KRT33B	Q14525	404 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PDK1	Q15118	436 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SZRD1	Q7Z422	152 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	FAM136A	Q96C01	138 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SPATA17	Q96L03	361 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SLITRK1	Q96PX8	696 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TUBB6	Q9BUF5	446 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	EPN3	Q9H201	632 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212		Q9H521	79 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TAS2R14	Q9NYV8	317 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SIK3	Q9Y2K2	1263 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TTC36	A6NLP5	189 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	RFC1	P35251	1148 aa	Predicted RBP	13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	PTGER2	P43116	358 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ERVK-9	P63128	1117 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	TMEM132B	Q14DG7	1078 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	FBXO47	Q5MNV8	452 aa		13.79	□□□□□ -0.2
BDNF-208	ENST00000418212	ZNF384	Q8TF68	577 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms