RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 RFPL1O75677 317 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 ABLIM3O94929 683 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 OSMP13725 252 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 IL1R2P27930 398 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 CD6P30203 668 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 NANOS2P60321 138 aaKnown RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 ERV3-1Q14264 604 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 RBMS2Q15434 407 aaKnown RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 PTPN21Q16825 1174 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 FLYWCH1Q4VC44 716 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 TRIM72Q6ZMU5 477 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 WDR53Q7Z5U6 358 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 CHPFQ8IZ52 775 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 C1orf162Q8NEQ5 155 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 CYP2W1Q8TAV3 490 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 CUL5Q93034 780 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 FAXDC2Q96IV6 333 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 THOC3Q96J01 351 aaKnown RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 FOXP1Q9H334 677 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 SMOC2Q9H3U7 446 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 TCF7L1Q9HCS4 588 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 AASDHPPTQ9NRN7 309 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 TXLNGQ9NUQ3 528 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 DLL3Q9NYJ7 618 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZIM2Q9NZV7 527 aa3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZCCHC6Q5VYS8 1495 aaKnown RBP3.14□□□□□ -1.91
HMGB3P2-201ENST00000411913 FAM90A8PA6NJQ4 464 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 SOAT2O75908 522 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 SCGB1D2O95969 90 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ANXA1P04083 346 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 PDHA1P08559 390 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 FAM90A13PP0C7W8 464 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 FAM90A24PP0C7X0 464 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 MYBL2P10244 700 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 PRF1P14222 555 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ENGP17813 658 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCND1P24385 295 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ATP5F1P24539 256 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 MT3P25713 68 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 IARSP41252 1262 aaKnown RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 RECQLP46063 649 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 GPR3P46089 330 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 HTR6P50406 440 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 CYP4F2P78329 520 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 GTF2H3Q13889 308 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 NPY5RQ15761 445 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ABCB5Q2M3G0 1257 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 CERKLQ49MI3 558 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF628Q5EBL2 1059 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 TMEM240Q5SV17 173 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 NXNQ6DKJ4 435 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 PGM2L1Q6PCE3 622 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 TSR2Q969E8 191 aaKnown RBP3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCDC136Q96JN2 1154 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 MKS1Q9NXB0 559 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 MDFICQ9P1T7 246 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF180Q9UJW8 692 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 FANCIQ9NVI1 1328 aa3.13□□□□□ -1.91
HMGB3P2-201ENST00000411913 E9PLN8 166 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 H3BNX3 289 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 DSCR3O14972 297 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 KIF3BO15066 747 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 PPM1DO15297 605 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 KRT86O43790 486 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 SNUPNO95149 360 aaKnown RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 MT-CO1P00395 513 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 CRYABP02511 175 aaKnown RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 U2AF1L5P0DN76 240 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 PDE1AP54750 535 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 U2AF1Q01081 240 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 TARDBPQ13148 414 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 KRT81Q14533 505 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCBP2Q15366 365 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 TRIM71Q2Q1W2 868 aaKnown RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 FAM102BQ5T8I3 360 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 TAF2Q6P1X5 1199 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 C9orf47Q6ZRZ4 202 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 AMOTL1Q8IY63 956 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 TCEAL8Q8IYN2 117 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 MYO1HQ8N1T3 1032 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 LRRC71Q8N4P6 559 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 CPA6Q8N4T0 437 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 PSD4Q8NDX1 1056 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 NRG4Q8WWG1 115 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 COQ8BQ96D53 544 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 DAZAP1Q96EP5 407 aaKnown RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 RITA1Q96K30 269 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 SLC2A13Q96QE2 648 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 CTAGE1Q96RT6 745 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 MACROD1Q9BQ69 325 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 VKORC1Q9BQB6 163 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 RTFDC1Q9BY42 306 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 RHOBTB2Q9BYZ6 727 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 POT1Q9NUX5 634 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 ICKQ9UPZ9 632 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 ANKRD6Q9Y2G4 727 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 LUC7L2Q9Y383 392 aaKnown RBP3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 MRFAP1Q9Y605 127 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms