RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 ABRAQ8N0Z2 381 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 USP6NLQ92738 828 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TRIM56Q9BRZ2 755 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 LIASO43766 372 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 ATP5HO75947 161 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 USP1O94782 785 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 SNUPNO95149 360 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 GLRA2P23416 452 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 PSMD6Q15008 389 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 SPDYCQ5MJ68 293 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 FNBP1LQ5T0N5 605 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 NUDCD3Q8IVD9 361 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 ZCCHC9Q8N567 271 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 NSL1Q96IY1 281 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 HEXIM2Q96MH2 286 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 MIS12Q9H081 205 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 ACSS2Q9NR19 701 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 GRID1Q9ULK0 1009 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TTLL3Q9Y4R7 772 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CFLARO15519 480 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 KCNN4O15554 427 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 STK10O94804 968 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 IVDP26440 423 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CAP2P40123 477 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CHI3L2Q15782 390 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 FAM102AQ5T9C2 384 aaPredicted RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 FBXO41Q8TF61 875 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 C2CD2Q9Y426 696 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 ADGRA3Q8IWK6 1321 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CYB561D2O14569 222 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 IRF6O14896 467 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PSAPP07602 524 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PTPN4P29074 926 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PAPOLAP51003 745 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 GPC3P51654 580 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PDE1BQ01064 536 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 KRT76Q01546 638 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 RIPK1Q13546 671 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 ZNF699Q32M78 642 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 GRAMD1BQ3KR37 738 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PRPF39Q86UA1 669 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 UNC45BQ8IWX7 931 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 MAGEC3Q8TD91 643 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 CEP41Q9BYV8 373 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 IFT122Q9HBG6 1241 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 WASF2Q9Y6W5 498 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 LAMB2P55268 1798 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 IQANK1A0A1B0GTG1 560 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 KBTBD13C9JR72 458 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 ASMTLO95671 621 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 ETS2P15036 469 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 GM2AP17900 193 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 HMGCS2P54868 508 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 USP4Q13107 963 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 CYP1B1Q16678 543 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 TFDP3Q5H9I0 405 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 C16orf46Q6P387 395 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 CEP128Q6ZU80 1094 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 CLNKQ7Z7G1 428 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 SDCCAG8Q86SQ7 713 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 HERC5Q9UII4 1024 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 RIPK3Q9Y572 518 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 FCHO1O14526 889 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 ZNF862O60290 1169 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PEX11AO75192 247 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 F7P08709 466 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 JAK3P52333 1124 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PGM5Q15124 567 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 RASA2Q15283 850 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PDK4Q16654 411 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 PTPRN2Q92932 1015 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 APOBEC3GQ9HC16 384 aaKnown RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 JPH1Q9HDC5 661 aaPredicted RBP11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 NMRK1Q9NWW6 199 aa11.55□□□□□ -0.56
NECTIN4-201ENST00000368012 FIS1Q9Y3D6 152 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms