RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TJP2Q9UDY2 1190 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 hCG_1818297A0A087WSY0 165 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 LIASO43766 372 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 KRT10P13645 584 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
SAMM50-201ENST00000350028 RGS2P41220 211 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
SAMM50-201ENST00000350028 PDCLQ13371 301 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 KAZNQ674X7 775 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 EIF2AQ9BY44 585 aaKnown RBP17.59■□□□□ 0.41
SAMM50-201ENST00000350028 METTL5Q9NRN9 209 aaKnown RBP17.59■□□□□ 0.41
SAMM50-201ENST00000350028 NOVA2Q9UNW9 492 aaKnown RBP17.59■□□□□ 0.41
SAMM50-201ENST00000350028 GRIN2DO15399 1336 aa17.59■□□□□ 0.41
SAMM50-201ENST00000350028 LRRD1A4D1F6 860 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 TP73O15350 636 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 RIPK2O43353 540 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 MDH1P40925 334 aaKnown RBP17.58■□□□□ 0.41
SAMM50-201ENST00000350028 CDKN2BP42772 138 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 ITGA8P53708 1063 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.41
SAMM50-201ENST00000350028 ADCY2Q08462 1091 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 C17orf99Q6UX52 265 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 ALKAL1Q6UXT8 129 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 RAPGEF5Q92565 580 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 TLCD1Q96CP7 247 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 PGM2Q96G03 612 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 KATNAL1Q9BW62 490 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 FOXP3Q9BZS1 431 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 CNTN3Q9P232 1028 aa17.58■□□□□ 0.41
SAMM50-201ENST00000350028 SRRM3A6NNA2 597 aaPredicted RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 LRCH4O75427 683 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 SHBGP04278 402 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 MYL3P08590 195 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 TXNRD3NBQ6F5E7 133 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 CEP128Q6ZU80 1094 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 NME8Q8N427 588 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 UBA3Q8TBC4 463 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 ZMAT2Q96NC0 199 aaKnown RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 FRMD8P1Q9BZ68 369 aaPredicted RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 ASNSD1Q9NWL6 643 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 UBQLN1Q9UMX0 589 aaKnown RBP17.58■□□□□ 0.4
SAMM50-201ENST00000350028 TLL2Q9Y6L7 1015 aa17.58■□□□□ 0.4
SAMM50-201ENST00000350028 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 RNF8O76064 485 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 SETSIPP0DME0 302 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 CYP2B6P20813 491 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 KLRC2P26717 231 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 INHBEP58166 350 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 PPP2R2AP63151 447 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 SNX17Q15036 470 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 TRIP13Q15645 432 aaPredicted RBP17.57■□□□□ 0.4
SAMM50-201ENST00000350028 CCDC25Q86WR0 208 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 ARFGAP1Q8N6T3 406 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 ROPN1BQ9BZX4 212 aaPredicted RBP17.57■□□□□ 0.4
SAMM50-201ENST00000350028 ROPN1Q9HAT0 212 aaPredicted RBP17.57■□□□□ 0.4
SAMM50-201ENST00000350028 AAASQ9NRG9 546 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 TSPAN16Q9UKR8 245 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 TRIP11Q15643 1979 aa17.57■□□□□ 0.4
SAMM50-201ENST00000350028 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 NDC80O14777 642 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 XPOTO43592 962 aaKnown RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 CD4P01730 458 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 GNAT1P11488 350 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 CYP3A5P20815 502 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 HPDP32754 393 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 HIC1Q14526 733 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 CCL14Q16627 93 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 TAZQ16635 292 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 IZUMO3Q5VZ72 239 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 UNC93AQ86WB7 457 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 TTC13Q8NBP0 860 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 SOCS4Q8WXH5 440 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 NKD2Q969F2 451 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 APBA2Q99767 749 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 FAM118BQ9BPY3 351 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 CDC42EP4Q9H3Q1 356 aaKnown RBP17.56■□□□□ 0.4
SAMM50-201ENST00000350028 DNPEPQ9ULA0 475 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 ZNF148Q9UQR1 794 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 SNX9Q9Y5X1 595 aa17.56■□□□□ 0.4
SAMM50-201ENST00000350028 C17orf102A2RUQ5 167 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 FAM155AB1AL88 458 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 TREHO43280 583 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CAND2O75155 1236 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 RECQL4O94761 1208 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 IGHA2P01877 340 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 KDELR1P24390 212 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CDR1P51861 262 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CRYBB1P53674 252 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 VCPP55072 806 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 SNX16P57768 344 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 MAGOHP61326 146 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 GOLGA7BQ2TAP0 167 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 FAM102AQ5T9C2 384 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms