RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 WLSQ5T9L3 541 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 LRRC6Q86X45 466 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 SLC17A7Q9P2U7 560 aa13.53□□□□□ -0.24
HMGCS1-201ENST00000325110 SLX4Q8IY92 1834 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 hCG_1818297A0A087WSY0 165 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 NAMPTP43490 491 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 CAPSQ13938 189 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 PIGHQ14442 188 aaPredicted RBP13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 ZNF268Q14587 947 aaPredicted RBP13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 CRELD2Q6UXH1 353 aaPredicted RBP13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 PHF13Q86YI8 300 aaPredicted RBP13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 RDM1Q8NG50 284 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 STMN2Q93045 179 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 RILPQ96NA2 401 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 GMLQ99445 158 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 TRIM55Q9BYV6 548 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 HEY2Q9UBP5 337 aa13.52□□□□□ -0.24
HMGCS1-201ENST00000325110 PMM2O15305 246 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 AVILO75366 819 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 HAUS5O94927 633 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 KLRC2P26717 231 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 PTK7Q13308 1070 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 OTOAQ7RTW8 1153 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 AGBL3Q8NEM8 1001 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 ADPGKQ9BRR6 497 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 RAB6BQ9NRW1 208 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 GYG2O15488 501 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 ASMTLO95671 621 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 ARFIP2P53365 341 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 FNBP1LQ5T0N5 605 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TTC8Q8TAM2 541 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TSSK1BQ9BXA7 367 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TBC1D10AQ9BXI6 508 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 YIPF3Q9GZM5 350 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 PORCNQ9H237 461 aa13.52□□□□□ -0.25
HMGCS1-201ENST00000325110 TCRBV7S3A2A0A539 114 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 ARMCX1Q9P291 453 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 LGALS13Q9UHV8 139 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 KCNG1Q9UIX4 513 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 PLSCR1O15162 318 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 MAFGO15525 162 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 APRTP07741 180 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 KRT7P08729 469 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 CXCL8P10145 99 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 RPL22P35268 128 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 ELK3P41970 407 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 GADL1Q6ZQY3 521 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 TEX2Q8IWB9 1127 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 MIEF2Q96C03 454 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 PCDH9Q9HC56 1237 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 FBXO6Q9NRD1 293 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 UBR3Q6ZT12 1888 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 SYNJ2BP-COX16A0A087WUM0 186 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 A0A0B4J269 797 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 EDN1P05305 212 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 BGNP21810 368 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 CLCN3P51790 818 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 BMPR2Q13873 1038 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 RNF43Q68DV7 783 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 VCPIP1Q96JH7 1222 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 COX16Q9P0S2 106 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 SENP1Q9P0U3 644 aa13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 MAGED2Q9UNF1 606 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-201ENST00000325110 EDF1O60869 148 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 PDK4Q16654 411 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 KLHL38Q2WGJ6 581 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 TNFAIP8L3Q5GJ75 292 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 RFWD2Q8NHY2 731 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 SHOC2Q9UQ13 582 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms