RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 GALNT4Q8N4A0 578 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.76■□□□□ 0.754e-10■□□□□ 10.8
UBE2N-201ENST00000318066 LZTS1Q9Y250 596 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 SAC3D1A6NKF1 404 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 ST8SIA6P61647 398 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 KIZQ2M2Z5 673 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 MRNIPQ6NTE8 343 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 BRINP3Q76B58 766 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 UBE2OQ9C0C9 1292 aaKnown RBP19.76■□□□□ 0.75
UBE2N-201ENST00000318066 GPR141Q7Z602 305 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 DDX42Q86XP3 938 aaKnown RBP eCLIP19.76■□□□□ 0.75
UBE2N-201ENST00000318066 AGPAT3Q9NRZ7 376 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 SMARCAL1Q9NZC9 954 aa19.76■□□□□ 0.75
UBE2N-201ENST00000318066 EIF3LQ9Y262 564 aaKnown RBP19.76■□□□□ 0.75
UBE2N-201ENST00000318066 CES2O00748 559 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 F9P00740 461 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 RGS7P49802 495 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 BAATQ14032 418 aaPredicted RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 CHST13Q8NET6 341 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 ECSITQ9BQ95 431 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 C17orf80Q9BSJ5 609 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 GIMAP4Q9NUV9 329 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 AAR2Q9Y312 384 aaKnown RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 MAPK1P28482 360 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 PRKCEQ02156 737 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 LUZP2Q86TE4 346 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 SH3GL1Q99961 368 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 CTCFP49711 727 aaPredicted RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 TRMT5Q32P41 509 aaKnown RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 PIK3R5Q8WYR1 880 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 INPP5DQ92835 1189 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 GLI2P10070 1586 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 RRN3P2A6NIE6 340 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 EIF4E1BA6NMX2 242 aaKnown RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 KCNJ1P48048 391 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 USP49Q70CQ1 688 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 TMEM143Q96AN5 459 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 PABPC5Q96DU9 382 aaKnown RBP19.75■□□□□ 0.75
UBE2N-201ENST00000318066 HEY2Q9UBP5 337 aa19.75■□□□□ 0.75
UBE2N-201ENST00000318066 PURAQ00577 322 aaKnown RBP19.74■□□□□ 0.75
UBE2N-201ENST00000318066 PLOD1Q02809 727 aaPredicted RBP19.74■□□□□ 0.75
UBE2N-201ENST00000318066 CUL2Q13617 745 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 ARHGEF7Q14155 803 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 TRIM16LQ309B1 348 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 EXOSC4Q9NPD3 245 aaKnown RBP19.74■□□□□ 0.75
UBE2N-201ENST00000318066 POU4F1Q01851 419 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 CACHD1Q5VU97 1274 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SCUBE1Q8IWY4 988 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 OR6J1Q8NGC5 347 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 HPSEQ9Y251 543 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 GARTP22102 1010 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 AKT1P31749 480 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SCTRP47872 440 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 PEX5P50542 639 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 RCN1Q15293 331 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 HIST2H2ACQ16777 129 aaPredicted RBP19.74■□□□□ 0.75
UBE2N-201ENST00000318066 HIST2H2AA3Q6FI13 130 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 DENND1BQ6P3S1 775 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 TRIM65Q6PJ69 517 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SLC7A14Q8TBB6 771 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SIKE1Q9BRV8 207 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 UNC45BQ8IWX7 931 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 TBC1D16Q8TBP0 767 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SLC39A10Q9ULF5 831 aa19.74■□□□□ 0.75
UBE2N-201ENST00000318066 SDR42E2A6NKP2 422 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 PSMC3P17980 439 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 PTPAQ15257 358 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 BNC2Q6ZN30 1099 aaPredicted RBP19.73■□□□□ 0.75
UBE2N-201ENST00000318066 TMC2Q8TDI7 906 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 JMJD4Q9H9V9 463 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 DRG1Q9Y295 367 aaKnown RBP19.73■□□□□ 0.75
UBE2N-201ENST00000318066 PTPRUQ92729 1446 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 SETBP1Q9Y6X0 1596 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 TSPOAP1O95153 1857 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 VWA5AO00534 786 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 CTDNEP1O95476 244 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 NUDT2P50583 147 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 PRKAA2P54646 552 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 FAM151AQ8WW52 585 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 CAAP1Q9H8G2 361 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 LRRC40Q9H9A6 602 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 CTNNAL1Q9UBT7 734 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 SFMBT1Q9UHJ3 866 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 LOC100653049A0A140TA62 436 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 KRT34O76011 436 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 LSM8O95777 96 aaKnown RBP19.73■□□□□ 0.75
UBE2N-201ENST00000318066 PTPN4P29074 926 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 CHRNB3Q05901 458 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 CCNG2Q16589 344 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 TFDP3Q5H9I0 405 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 FAM71DQ8N9W8 422 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 EXD1Q8NHP7 514 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 RMND5AQ9H871 391 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 TAGLN3Q9UI15 199 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 RAD54BQ9Y620 910 aa19.73■□□□□ 0.75
UBE2N-201ENST00000318066 UBTFL6P0CB48 400 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms