RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
SSH3-201ENST00000308127 TEX2Q8IWB9 1127 aa17.42■□□□□ 0.38
SSH3-201ENST00000308127 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
SSH3-201ENST00000308127 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
SSH3-201ENST00000308127 ZBTB10Q96DT7 871 aa17.42■□□□□ 0.38
SSH3-201ENST00000308127 CALN1Q9BXU9 219 aa17.42■□□□□ 0.38
SSH3-201ENST00000308127 E5RJQ4 531 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 ATP2A1O14983 1001 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 KCNA2P16389 499 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 MUM1Q2TAK8 710 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 GNPTABQ3T906 1256 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 ALYREFQ86V81 257 aaKnown RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 RIBC1Q8N443 379 aaPredicted RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 ARFGAP1Q8N6T3 406 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 FBXO27Q8NI29 283 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 RSAD2Q8WXG1 361 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 TTC25Q96NG3 672 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 XPO7Q9UIA9 1087 aaKnown RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 F5H423 210 aaPredicted RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 ATP4AP20648 1035 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 TFAMQ00059 246 aaKnown RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
SSH3-201ENST00000308127 DENND1BQ6P3S1 775 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 RINLQ6ZS11 566 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 MANSC1Q9H8J5 431 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
SSH3-201ENST00000308127 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSH3-201ENST00000308127 PYGBP11216 843 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CDH8P55286 799 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSH3-201ENST00000308127 IRX4P78413 519 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 LMNB2Q03252 620 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CTC1Q2NKJ3 1217 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 PARP6Q2NL67 630 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 SH3PXD2AQ5TCZ1 1133 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 VSIG10LQ86VR7 867 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CFAP36Q96G28 342 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 TMEM120AQ9BXJ8 343 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 BATF3Q9NR55 127 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 ZFATQ9P243 1243 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 WNT10BO00744 389 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 TOP3BO95985 862 aaKnown RBP17.4■□□□□ 0.38
SSH3-201ENST00000308127 RFX6Q8HWS3 928 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 CTAGE3PQ8IX95 158 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 MCPH1Q8NEM0 835 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 NRG4Q8WWG1 115 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 SYT15Q9BQS2 421 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 TSSK1BQ9BXA7 367 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
SSH3-201ENST00000308127 LPXNO60711 386 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 HAUS5O94927 633 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 MARK3P27448 753 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PTPN4P29074 926 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 ELK3P41970 407 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 KBTBD12Q3ZCT8 623 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 ACSBG2Q5FVE4 666 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 EFHC2Q5JST6 749 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 EEPD1Q7L9B9 569 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 ZNF276Q8N554 614 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 CLPTM1LQ96KA5 538 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
SSH3-201ENST00000308127 CYLDQ9NQC7 956 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 NMRK1Q9NWW6 199 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
SSH3-201ENST00000308127 PLA2G6O60733 806 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PSAPP07602 524 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 SRGAP2CP0DJJ0 459 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 TROVE2P10155 538 aaKnown RBP eCLIP17.39■□□□□ 0.37
SSH3-201ENST00000308127 BMPR2Q13873 1038 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 RCN2Q14257 317 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 CDHR3Q6ZTQ4 885 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PRPF39Q86UA1 669 aaKnown RBP17.39■□□□□ 0.37
SSH3-201ENST00000308127 CEP120Q8N960 986 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 SHKBP1Q8TBC3 707 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PCDH9Q9HC56 1237 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 PDLIM7Q9NR12 457 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 WASF2Q9Y6W5 498 aa17.39■□□□□ 0.37
SSH3-201ENST00000308127 GYG2O15488 501 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 GRAP2O75791 330 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 MT-ND3P03897 115 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 GJB1P08034 283 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 KRT19P08727 400 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 CCND2P30279 289 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 ARFIP2P53365 341 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 ARL4CP56559 192 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 PTK7Q13308 1070 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 C4orf50Q6ZRC1 276 aa17.38■□□□□ 0.37
SSH3-201ENST00000308127 TDRPQ86YL5 185 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms