RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 LRRC36Q1X8D7 754 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MDH1BQ5I0G3 518 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SNX31Q8N9S9 440 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NOA1Q8NC60 698 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MMP19Q99542 508 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 COPG2Q9UBF2 871 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 KLHL41O60662 606 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 NCALDP61601 193 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 MCL1Q07820 350 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 CNGA2Q16280 664 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 BOLA3Q53S33 107 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 XKR3Q5GH77 459 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 SEL1L3Q68CR1 1132 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 YTHDF3Q7Z739 585 aaKnown RBP7.94□□□□□ -1.14
SF3B3-201ENST00000302516 FEZF2Q8TBJ5 459 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PNKPQ96T60 521 aa7.94□□□□□ -1.14
SF3B3-201ENST00000302516 PP2D1A8MPX8 630 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PPP1R3GB7ZBB8 358 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 STX7O15400 261 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SNUPNO95149 360 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 THEMIS2Q5TEJ8 643 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SWSAP1Q6NVH7 229 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 VWDEQ8N2E2 1590 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PIGBQ92521 554 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 DYRK4Q9NR20 520 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 VTI1BQ9UEU0 232 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CRB1P82279 1406 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PTPRUQ92729 1446 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SDR42E2A6NKP2 422 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 NFIBO00712 420 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CYTH3O43739 400 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ATP6V1G2O95670 118 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 DCAF4L1Q3SXM0 396 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SUSD4Q5VX71 490 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 MOXD1Q6UVY6 613 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF786Q8N393 782 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PPP2R3CQ969Q6 453 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF333Q96JL9 665 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 AP3M1Q9Y2T2 418 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PKP3Q9Y446 797 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SLC20A2Q08357 652 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF543Q08ER8 600 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SRBD1Q8N5C6 995 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF280CQ8ND82 737 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 APOL4Q9BPW4 351 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PARVBQ9HBI1 364 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 FOXN1O15353 648 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 FKBP9O95302 570 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 FAM58BPP0C7Q3 252 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PCSK1P29120 753 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 NUP62P37198 522 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 POU4F1Q01851 419 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 TAF2Q6P1X5 1199 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 FKBP9P1Q75LS8 142 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 GJB4Q9NTQ9 266 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 USE1Q9NZ43 259 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SHOC2Q9UQ13 582 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ECE2O60344 883 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CHRNB3Q05901 458 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ITGA9Q13797 1035 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 C1DQ13901 141 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SPATA2LQ8IUW3 424 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ECSITQ9BQ95 431 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 BBS2Q9BXC9 721 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PAPOLBQ9NRJ5 636 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 AAR2Q9Y312 384 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 RAD54BQ9Y620 910 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CNTNAP5Q8WYK1 1306 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ADGRB2O60241 1585 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ASNA1O43681 348 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 TGM2P21980 687 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 TAB1Q15750 504 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 EXD1Q8NHP7 514 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 GINS4Q9BRT9 223 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 DEPDC5O75140 1603 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 PNMA8CA0A1B0GUJ8 204 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM49D1C9J1S8 452 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 NCAM2O15394 837 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 WBP4O75554 376 aaKnown RBP7.93□□□□□ -1.14
SF3B3-201ENST00000302516 FSBPO95073 299 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 GUCA1CO95843 209 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 EMC2Q15006 297 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 CYP4Z1Q86W10 505 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SVOPQ8N4V2 548 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 SYTL2Q9HCH5 934 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ANKEF1Q9NU02 776 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ATAD3AQ9NVI7 634 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ALG6Q9Y672 507 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 WDR72Q3MJ13 1102 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 C16orf86Q6ZW13 317 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 IKBIPQ70UQ0 350 aa7.93□□□□□ -1.14
SF3B3-201ENST00000302516 ISCA1Q9BUE6 129 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms